DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-Ma2d and CG42818

DIOPT Version :9

Sequence 1:NP_001260486.1 Gene:Ca-Ma2d / 34951 FlyBaseID:FBgn0261999 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster


Alignment Length:686 Identity:135/686 - (19%)
Similarity:227/686 - (33%) Gaps:205/686 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LAQKITKSQEIKEKYKEYNARVELKNGTELIKSITKNVGRMLA---RKMDAVRCIQERAEYVNEN 130
            |.|.:....:::|......||:.|....|..||:..:..:.:.   :.:|.:..:.|..|.:|:|
  Fly   222 LKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKN 286

  Fly   131 F-----------EFNLT-----------YALQNFTYFSSKYSTFN-------------GNSSEEL 160
            .           .|..|           ||...|...||.:.:.:             ||..:.|
  Fly   287 LRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGL 351

  Fly   161 --------EPNEAEFAWMYRNME---LNPDTHFY-NTPVDTEH---SSVHVPSNIWDRSE----- 205
                    |.|:...:..|...|   :.|.|..| |..|.|.|   |:..|.:.|.|.|:     
  Fly   352 RNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMF 416

  Fly   206 RVLKTIMWSEHLDEVF--RQNYQSDPALSWQ---------YFGSDTGILRHYPAAQWTDTRPNRD 259
            .::|.|   |.|...:  :..:.|..:|:.:         .:.|..||..|    .:|.|.|...
  Fly   417 NLIKGI---EDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSH----SFTTTSPKTV 474

  Fly   260 DADTYDCRKRSWYIETATCSKDIVILLDHSGSMTGFRHHVAKFTIRSILDTFSNNDFFTILRYSS 324
            ...:......|......|.:.::.:....|......::.:.:  ::.:::.||:....|...||:
  Fly   475 TTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKE--LKGLIEHFSDTKNITSTTYST 537

  Fly   325 -EVNDIIPCFNGALVQATPENIEVFNQQIEQLDDPEGYANLTLAYETAFQLLRKYYDSRHCVTNS 388
             :.....|      ...||::.:..:.|  .:..||...:.|....|.         :.|..|.|
  Fly   538 GDSKSFQP------TATTPDSTDRSSSQ--PITFPESTTSTTNLQSTI---------TNHLSTES 585

  Fly   389 TCNQAIMLVTDGVAGNTT------------------------------EVFQKYNWGNGENGTSQ 423
            |.:|  :..|..:.|.||                              ::....|..|....|||
  Fly   586 TSSQ--LNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQ 648

  Fly   424 MDTRVFTYLLGKEVTKVREI--------QWMACLNRGYYSHVQTLDEVHEEVLKYVDV-IATPLV 479
            :.|. .|:.....:|....:        :.||..:..|.|..:.      .|.::.|| ...|::
  Fly   649 LTTE-STFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREI------TVFQFNDVENINPII 706

  Fly   480 LQNEQ------HPPTWTHAFTDKTYDPKTSNEKRPRLMISVGVPAFDRFYRHANSTNPRARLLGV 538
            ..|..      |..|:|.:.||.|    ||   .|.|..:...|.||....|:| |:.:.|.||.
  Fly   707 SNNSTTVTTNIHSSTYTTSTTDNT----TS---YPNLSTTESSPTFDSTISHSN-TSSQTRSLGS 763

  Fly   539 AGTDVP--VEDIDKL-----TLPYKL-------------------------GVNGYSFVVSNNGY 571
            ....:.  ||.:.||     ||..|.                         .|||.|..:.    
  Fly   764 YKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELE---- 824

  Fly   572 VLLHPDLRPIGTNGKMNPNYNSIDFT--EVEHLFED 605
            :||         :..:|||.::.|.|  ::..||:|
  Fly   825 ILL---------STTVNPNEDTTDLTMEKLLKLFDD 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-Ma2dNP_001260486.1 VWA_N 124..251 CDD:285584 39/192 (20%)
vWA_VGCC_like 267..461 CDD:238740 37/232 (16%)
Cache_1 510..587 CDD:280839 23/108 (21%)
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 33/135 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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