DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1D and TPC1

DIOPT Version :9

Sequence 1:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster
Sequence 2:NP_567258.1 Gene:TPC1 / 825655 AraportID:AT4G03560 Length:733 Species:Arabidopsis thaliana


Alignment Length:718 Identity:159/718 - (22%)
Similarity:271/718 - (37%) Gaps:177/718 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   791 YPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGF--VLHNGAYLRNGW----NLLDFTIVVI 849
            |.|....:||......|.:.|.|        :|.:.|  :.:.|:  |..|    ||:....|||
plant   108 YLGELPYLTNAESIIYEVITLAI--------LLVHTFFPISYEGS--RIFWTSRLNLVKVACVVI 162

  Fly   850 GAISTALSQLMKD--AFDVKALRAFRVLRPLRLVSGVPSLQ---VVLNSILKAMVPLFHIALLVL 909
            ..:...:..|...  |||....|....:|.:..:..:..|:   |:|:.:|...:.:  :||.:|
plant   163 LFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNI--LALWML 225

  Fly   910 FVIIIYAIIGLELFSGKLHKACRDEITGEYEENIRPCGVGYQCPPGYKCYGGW------DGPNDG 968
            |::                                              :..|      :....|
plant   226 FLL----------------------------------------------FASWIAFVMFEDTQQG 244

  Fly   969 ITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGE 1033
            :|.|.::|..:..:|...|.....||.  |.....|.|..::|:..|::|.:||.||||.|:...
plant   245 LTVFTSYGATLYQMFILFTTSNNPDVW--IPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDS 307

  Fly  1034 FSKERNKAKNRGDFQKLREKQQ----IEEDLRGYLD------------------WITQAEDIEPD 1076
            |.::..|..:..|..|.|..::    |:.|..|.:|                  .|::.|     
plant   308 FKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEE----- 367

  Fly  1077 AVGGLISDGKGKQPNEMDSTE----NLGEEMPEVQMTESRWRK-----MKKDFDRV-NRRMRRAC 1131
              .|||.|       |:|.|.    |..|.....|....|::|     :.:.|.:: :..:.:..
plant   368 --FGLIFD-------ELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQL 423

  Fly  1132 RKAVKSQAFYWLIIVLVFLN-------TGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKM 1189
            |..|:|..|.:.|..::.:|       |.:...|...|..|     :.....|..::..||.||:
plant   424 RAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPW-----QVAEFVFGWIYVLEMALKI 483

  Fly  1190 YSLGFQGYFVSLFNRFDCFV----VIGSITETLLT---NTGMMPPLGVSVLRCVRLLRVFKVTKY 1247
            |:.||:.|:....||||..|    |||. |.|.:|   ||.......:..|...|:||:.::...
plant   484 YTYGFENYWREGANRFDFLVTWVIVIGE-TATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMN 547

  Fly  1248 WRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGK--------EEKYRM-N 1303
            .:.....:|:.:..|.|:...|..:|..:.|:..:|:|||||..|...|        |:.|.: |
plant   548 VQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFN 612

  Fly  1304 FDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGAL-----ACIYFIILFICGNYILLNVF 1363
            |:.:...::|:|.::...:|...|          .||..|     :..||:..::....:|||:.
plant   613 FNDYPNGMVTLFNLLVMGNWQVWM----------ESYKDLTGTWWSITYFVSFYVITILLLLNLV 667

  Fly  1364 LAIAVDNLADADSLSEVEK-------EEEPHDESAQKKSHSPTPTIDGMDDHLSIDIDMEQQELD 1421
            :|..::.......|.|.||       |:.....||..||.|  ..:|.:..|:..| ::.:.|..
plant   668 VAFVLEAFFTELDLEEEEKCQGQDSQEKRNRRRSAGSKSRS--QRVDTLLHHMLGD-ELSKPECS 729

  Fly  1422 DED 1424
            ..|
plant   730 TSD 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:395416 55/267 (21%)
Ion_trans 1137..1379 CDD:395416 66/269 (25%)
Ion_trans 1496..1809 CDD:395416
Ion_trans 1851..2126 CDD:395416
GPHH 2135..2188 CDD:407139
Ca_chan_IQ 2199..2271 CDD:400901
TPC1NP_567258.1 Ion_trans 124..311 CDD:278921 50/246 (20%)
EFh 326..391 CDD:238008 15/78 (19%)
EF-hand_7 327..392 CDD:290234 15/78 (19%)
Ion_trans 456..675 CDD:278921 60/234 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 73 1.000 Domainoid score I3264
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto3926
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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