DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1D and TPC1

DIOPT Version :10

Sequence 1:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster
Sequence 2:NP_567258.1 Gene:TPC1 / 825655 AraportID:AT4G03560 Length:733 Species:Arabidopsis thaliana


Alignment Length:718 Identity:159/718 - (22%)
Similarity:271/718 - (37%) Gaps:177/718 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   791 YPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGF--VLHNGAYLRNGW----NLLDFTIVVI 849
            |.|....:||......|.:.|.|        :|.:.|  :.:.|:  |..|    ||:....|||
plant   108 YLGELPYLTNAESIIYEVITLAI--------LLVHTFFPISYEGS--RIFWTSRLNLVKVACVVI 162

  Fly   850 GAISTALSQLMKD--AFDVKALRAFRVLRPLRLVSGVPSLQ---VVLNSILKAMVPLFHIALLVL 909
            ..:...:..|...  |||....|....:|.:..:..:..|:   |:|:.:|...:.:  :||.:|
plant   163 LFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNI--LALWML 225

  Fly   910 FVIIIYAIIGLELFSGKLHKACRDEITGEYEENIRPCGVGYQCPPGYKCYGGW------DGPNDG 968
            |::                                              :..|      :....|
plant   226 FLL----------------------------------------------FASWIAFVMFEDTQQG 244

  Fly   969 ITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGE 1033
            :|.|.::|..:..:|...|.....||.  |.....|.|..::|:..|::|.:||.||||.|:...
plant   245 LTVFTSYGATLYQMFILFTTSNNPDVW--IPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDS 307

  Fly  1034 FSKERNKAKNRGDFQKLREKQQ----IEEDLRGYLD------------------WITQAEDIEPD 1076
            |.::..|..:..|..|.|..::    |:.|..|.:|                  .|::.|     
plant   308 FKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEE----- 367

  Fly  1077 AVGGLISDGKGKQPNEMDSTE----NLGEEMPEVQMTESRWRK-----MKKDFDRV-NRRMRRAC 1131
              .|||.|       |:|.|.    |..|.....|....|::|     :.:.|.:: :..:.:..
plant   368 --FGLIFD-------ELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQL 423

  Fly  1132 RKAVKSQAFYWLIIVLVFLN-------TGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKM 1189
            |..|:|..|.:.|..::.:|       |.:...|...|..|     :.....|..::..||.||:
plant   424 RAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPW-----QVAEFVFGWIYVLEMALKI 483

  Fly  1190 YSLGFQGYFVSLFNRFDCFV----VIGSITETLLT---NTGMMPPLGVSVLRCVRLLRVFKVTKY 1247
            |:.||:.|:....||||..|    |||. |.|.:|   ||.......:..|...|:||:.::...
plant   484 YTYGFENYWREGANRFDFLVTWVIVIGE-TATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMN 547

  Fly  1248 WRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGK--------EEKYRM-N 1303
            .:.....:|:.:..|.|:...|..:|..:.|:..:|:|||||..|...|        |:.|.: |
plant   548 VQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFN 612

  Fly  1304 FDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGAL-----ACIYFIILFICGNYILLNVF 1363
            |:.:...::|:|.::...:|...|          .||..|     :..||:..::....:|||:.
plant   613 FNDYPNGMVTLFNLLVMGNWQVWM----------ESYKDLTGTWWSITYFVSFYVITILLLLNLV 667

  Fly  1364 LAIAVDNLADADSLSEVEK-------EEEPHDESAQKKSHSPTPTIDGMDDHLSIDIDMEQQELD 1421
            :|..::.......|.|.||       |:.....||..||.|  ..:|.:..|:..| ::.:.|..
plant   668 VAFVLEAFFTELDLEEEEKCQGQDSQEKRNRRRSAGSKSRS--QRVDTLLHHMLGD-ELSKPECS 729

  Fly  1422 DED 1424
            ..|
plant   730 TSD 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:459842 55/267 (21%)
Ion_trans 1137..1379 CDD:459842 66/269 (25%)
Ion_trans 1496..1809 CDD:459842
Ion_trans 1851..2126 CDD:459842
GPHH 2135..2188 CDD:465306
Ca_chan_IQ 2198..2273 CDD:462591
TPC1NP_567258.1 Ion_trans 124..315 CDD:459842 50/250 (20%)
FRQ1 <307..393 CDD:444056 20/99 (20%)
Ion_trans 429..675 CDD:459842 65/261 (25%)
Blue background indicates that the domain is not in the aligned region.

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