Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005166128.1 | Gene: | scn8ab / 793996 | ZFINID: | ZDB-GENE-060906-2 | Length: | 1969 | Species: | Danio rerio |
Alignment Length: | 1950 | Identity: | 476/1950 - (24%) |
---|---|---|---|
Similarity: | 821/1950 - (42%) | Gaps: | 544/1950 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 747 ALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFL 811
Fly 812 VIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLR 876
Fly 877 PLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKAC---------- 931
Fly 932 -----------RDEITGEYEENIRP-------CGVGY---QCPPGYKCYGGWDGPNDGITNFDNF 975
Fly 976 GLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSK---- 1036
Fly 1037 -----ERNKAKNRGDFQKLREKQQ------------------IEEDLRGYLD------------- 1065
Fly 1066 ----------W------------------------------------------------------ 1066
Fly 1067 -----------------------ITQAED------------------------------------ 1072
Fly 1073 --IEPDAVGGLISDGKGKQPNEM--------DST-------ENLGEEMPEV-QMTESRWRKMKKD 1119
Fly 1120 FDRVNRRM--------------RRACRKA-----------------VKSQAFYWLII-------- 1145
Fly 1146 --VLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCF 1208
Fly 1209 VVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLF 1273
Fly 1274 LFIVIFALLGMQVFGGKFNFDGKE---------EKYRMNFDCFWQALLTVFQIMTGEDWNAVMYV 1329
Fly 1330 GINAYGGVSSYGALACIYFIILFICGNYILLNVFLAI-----AVDNLADADSLSE---------- 1379
Fly 1380 ------------------------VEKEEEPHDESAQKK-------------------------- 1394
Fly 1395 --------------------SHSPTPTID-----GMDD-------HLSIDIDME-QQELDDEDKM 1426
Fly 1427 DHETLS---DEEVREMCE-EEEEVDEEGMIT----ARPRRMSEVNTATKILPIPPGTS---FFLF 1480
Fly 1481 SQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENP-LRANDDLNKVLNKFDYFFTAVFTIE 1544
Fly 1545 LILKLISYGFVLH-DGAFCRSAFNLLDLLVVCVSLISLVSSS---NAISVVKILRVLRVLRPLRA 1605
Fly 1606 INRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTY 1670
Fly 1671 LLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGD---VHKPRLREREWSNNRFHFD 1732
Fly 1733 DVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGF 1797
Fly 1798 VIVTFQNE----GEQEYKNCDLDKNQRNCIEFALKAKPVRRYIPK--HGIQYKVWWFVTSSSFEY 1856
Fly 1857 TIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDF 1921
Fly 1922 IIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGE 1986
Fly 1987 GIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVL 2051
Fly 2052 FRSATGEAWQEIMMS-CSAQPDVKCDMNSDTPGEP----CGSSIAYPYFISFYVLCSFLI-INLF 2110
Fly 2111 VAVIMDNFDYLTRDWS-ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCP 2174
Fly 2175 HRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKRTNPKL 2239
Fly 2240 LDQVVPPP------GNDDEVT---VGKFYATYLIQDYF---RRFKKRK------EQEGKEGHPDS 2286 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 86/314 (27%) |
Ion_trans | 1137..1379 | CDD:395416 | 82/265 (31%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 94/324 (29%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 85/280 (30%) | ||
GPHH | 2135..2188 | CDD:407139 | 13/52 (25%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 17/83 (20%) | ||
scn8ab | XP_005166128.1 | Ion_trans | 133..423 | CDD:306908 | 85/304 (28%) |
ARGLU | <418..449 | CDD:330370 | 4/30 (13%) | ||
Na_trans_cytopl | 503..672 | CDD:314757 | 15/168 (9%) | ||
Ion_trans | 736..949 | CDD:306908 | 68/227 (30%) | ||
Na_trans_assoc | 975..1178 | CDD:310839 | 36/217 (17%) | ||
Ion_trans | 1183..1459 | CDD:306908 | 93/319 (29%) | ||
Na_channel_gate | 1451..1503 | CDD:240441 | 12/52 (23%) | ||
Ion_trans | 1508..1762 | CDD:306908 | 85/278 (31%) | ||
GPHH | 1766..1829 | CDD:318993 | 16/67 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |