DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1D and CACNA1E

DIOPT Version :10

Sequence 1:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster
Sequence 2:XP_016857732.1 Gene:CACNA1E / 777 HGNCID:1392 Length:2458 Species:Homo sapiens


Alignment Length:2553 Identity:865/2553 - (33%)
Similarity:1197/2553 - (46%) Gaps:696/2553 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   586 IDEQEQQHDQGDSAEEEDDDEDV-------------DEYFEEEEDDTQAF----------SPFYS 627
            :.|:|....|..:..|.|..::|             |.:|:.:|.:.|.:          |||..
Human    41 LPEEEAWRPQQCALLEADASDEVGMLPASPRAASGFDNFFQVQEGEGQGWEGAMALEAGSSPFLP 105

  Fly   628 SSAELIDNFGGGAGKFFNIM-----------------DFERGASGEGGFSPNGNGGPGSGDVSRT 675
            .|.|::....||..:..:|:                 ::|....||                :..
Human   106 VSPEVMKRRRGGLIEQRDIIKAHEAHKMQSTPQARRKEWEMARFGE----------------AVV 154

  Fly   676 ARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRGKPQ 740
            ||..||:||.....|..|.                  |..|.||........|.:.|......|.
Human   155 ARPGSGDGDSDQSRNRQGT------------------PVPASGQAAAYKQTKAQRARTMALYNPI 201

  Fly   741 PDRP-----QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTN 800
            |.|.     .|:||.....|.:|....::::|.|||::||.||.||||.||:....|..|....:
Human   202 PVRQNCFTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMS 266

  Fly   801 QTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFD 865
            :.|||.|..|:.||..|..:||:|.||:.|.|:|||||||::||.:|:.|.::||.:. .....|
Human   267 RRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTH-FNTHVD 330

  Fly   866 VKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKA 930
            ::.|||.||||||:||||:||||:||.||:||||||..|.||:.|.|:::||||||.:|||||:|
Human   331 LRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRA 395

  Fly   931 CRDEITGEYE--ENIRPCGVGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTD 993
            |....:|..|  :...|||| ..||.||:| ..|.|||||||.|||...|:||||||:|:||||.
Human   396 CFMNNSGILEGFDPPHPCGV-QGCPAGYEC-KDWIGPNDGITQFDNILFAVLTVFQCITMEGWTT 458

  Fly   994 VLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQQIEE 1058
            |||:..||:|:.|.|:|||.::|:|:|||:||:||||||||:|||.:.:||..|.|||.:||||.
Human   459 VLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIER 523

  Fly  1059 DLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTENLGEEMPEVQMTESRWRKMKKD---- 1119
            :|.||..||.:||::       :::     :.|:...|..| |.:....:..||...|.:|    
Human   524 ELNGYRAWIDKAEEV-------MLA-----EENKNAGTSAL-EVLRRATIKRSRTEAMTRDSSDE 575

  Fly  1120 ---------------------------FDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLAT 1157
                                       |....|.:|.:.|..||||.|||:::.||.|||..:|.
Human   576 HCVDISSVGTPLARASIKSAKVDGVSYFRHKERLLRISIRHMVKSQVFYWIVLSLVALNTACVAI 640

  Fly  1158 EHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNT 1222
            .|:.|..||.:...|....|:|||..||.||||.:|.:.||.|.||.||..|.:|||.|.:....
Human   641 VHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVTVGSIFEVVWAIF 705

  Fly  1223 GMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVF 1287
            ......|:||||.:||||:||:||||.||.|||.||::|::||.|||.|||||||:|||||||:|
Human   706 RPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLF 770

  Fly  1288 GGKFNF-DGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIIL 1351
            ||:||| ||...   .|||.|..|::|||||:||||||.|||.||.:.||||| |..:.||||:|
Human   771 GGRFNFNDGTPS---ANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSS-GMWSAIYFIVL 831

  Fly  1352 FICGNYILLNVFLAIAVDNLADADSLSEVEKEEE-----------------------PHDESAQK 1393
            .:.|||.||||||||||||||:|..|::.|:|||                       |..|..::
Human   832 TLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNMPSIERDRR 896

  Fly  1394 KSH-----------------------------------------------SPT------------ 1399
            :.|                                               :||            
Human   897 RRHHMSMWEPRSSHLRERRRRHHMSVWEQRTSQLRKHMQMSSQEALNREEAPTMNPLNPLNPLSS 961

  Fly  1400 -------PTI--------------------------------DGMDDHLSID------------- 1412
                   |::                                ||.|...::|             
Human   962 LNPLNAHPSLYRRPRAIEGLALGLALEKFEEERISRGGSLKGDGGDRSSALDNQRTPLSLGQREP 1026

  Fly  1413 ----------IDMEQQE------------------------------------------------ 1419
                      .|..|||                                                
Human  1027 PWLARPCHGNCDPTQQEAGGGEAVVTFEDRARHRQSQRRSRHRRVRTEGKESSSASRSRSASQER 1091

  Fly  1420 -LDD----EDKMDHE----------TLSDEEVRE------------------------------- 1438
             ||:    |.:.|||          |:.:|..::                               
Human  1092 SLDEAMPTEGEKDHELRGNHGAKEPTIQEERAQDLRRTNSLMVSRGSGLAGGLDEADTPLVLPHP 1156

  Fly  1439 ---------MCEEEEEVDEE----------------------GMITAR-PRRMSEVNTATKILP- 1470
                     :.|:|.|...|                      ..|||. .:..:|..:.|..:| 
Human  1157 ELEVGKHVVLTEQEPEGSSEQALLGNVQLDMGRVISQSEPDLSCITANTDKATTESTSVTVAIPD 1221

  Fly  1471 --------------------------------------------------IPPGTSFFLFSQTNR 1485
                                                              :.|.:|.|:||.||.
Human  1222 VDPLVDSTVVHISNKTDGEASPLKEAEIREDEEEVEKKKQKKEKRETGKAMVPHSSMFIFSTTNP 1286

  Fly  1486 FRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLI 1550
            .|..||::.|...|...||..|..||..||||:|:..|.:.||||..|||.||.|||.|:::|:|
Human  1287 IRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFTFEMVIKMI 1351

  Fly  1551 SYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNA--------ISVVKILRVLRVLRPLRAIN 1607
            ..|.:|.||::.|..:|:||.:||..:|::. :.:||        |..:|.||||||||||:.|.
Human  1352 DQGLILQDGSYFRDLWNILDFVVVVGALVAF-ALANALGTNKGRDIKTIKSLRVLRVLRPLKTIK 1415

  Fly  1608 RAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLL 1672
            |...||.|..                                    |||.::|.:.||::|..|.
Human  1416 RLPKLKAVFD------------------------------------CVVTSLKNVFNILIVYKLF 1444

  Fly  1673 QFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKG 1737
            .|:||||.|||||||||.|||.||.|:.||.|.|:   |.:.:|..::.|||..:.||:|::...
Human  1445 MFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYV---DHEKNKMEVKGREWKRHEFHYDNIIWA 1506

  Fly  1738 MLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTF 1802
            :||||||||.||||.:|..|:|..:|:.||..:.|..::.:|::|.::..||.|||||..:|:||
Human  1507 LLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITF 1571

  Fly  1803 QNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIFILIMIN 1865
            |.:|::..:.|.|:||:|.||:||:.|||:.||:|  :|..||:||.||.|.||||||..:|.:|
Human  1572 QEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALN 1636

  Fly  1866 TVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFID 1930
            ||.|.||:|:.|..|...|..||:.||.||:||.|.|:.||.|.|||.|.||:||||.|:||..:
Human  1637 TVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITE 1701

  Fly  1931 IVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTF 1995
            |:.::.|..:||                  |.|:   :|.:|||..||:|||.:|..||.|||||
Human  1702 IILTDSKLVNTS------------------GFNM---SFLKLFRAARLIKLLRQGYTIRILLWTF 1745

  Fly  1996 IKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAW 2060
            ::||:|||||.|||.:||||||::||||||.|.||..:.|..:|||::|..::::||||||||||
Human  1746 VQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESHINRHNNFRSFFGSLMLLFRSATGEAW 1810

  Fly  2061 QEIMMSCSAQPDVKCDMNSDTP-----GEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNFDY 2120
            ||||:||..:..  |:.::..|     .|.||:.:||.||:||...||||::|||||||||||:|
Human  1811 QEIMLSCLGEKG--CEPDTTAPSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEY 1873

  Fly  2121 LTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSM 2185
            ||||.|||||||||||:|:|:|||..|.|||.:.::..:|..:|||||.||.||.::|.||||.|
Human  1874 LTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLM 1938

  Fly  2186 NMPLNSDGTVLFNATLFAVVRTSLSIK-TDGNID--DANSELRATIKQIWKRTNPKLLDQVVPPP 2247
            |||:..|.||.|.:||.|::||:|.|| ..|..|  ..:|||:.....||...:.|:||.:||.|
Human  1939 NMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQLDSELQKETLAIWPHLSQKMLDLLVPMP 2003

  Fly  2248 GNDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEGHPDSNTVTLQAGLRTLHEVSP-ALKRAISG 2311
            ...| :||||.||..:|.||:::.|.:|:::..|.         |........:.| :|.:.|..
Human  2004 KASD-LTVGKIYAAMMIMDYYKQSKVKKQRQQLEE---------QKNAPMFQRMEPSSLPQEIIA 2058

  Fly  2312 N---LDELDQEP-------------EPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQ---- 2356
            |   |..|.|:|             .|:..:  .:|..........|....|:|.:...|:    
Human  2059 NAKALPYLQQDPVSGLSGRSGYPSMSPLSPQ--DIFQLACMDPADDGQFQERQSLEPEVSELKSV 2121

  Fly  2357 --SNGALAIGGSASAALGVG-GSSLVLGSSDP--------------------AGGDYLYD-TLNR 2397
              ||..:.:........|.| .||:...:.||                    :...:|.: ::.|
Human  2122 QPSNHGIYLPSDTQEHAGSGRASSMPRLTVDPQVVTDPSSMRRSFSTIRDKRSNSSWLEEFSMER 2186

  Fly  2398 SVADGVNNITRNIMQARLAAAGKLQDELQGAG-------SGGELRTFGESISMRPLAKNGGGAAT 2455
            |..:...:..|:...:...:|.:|..:   :|       |||..|  |.|...:.|         
Human  2187 SSENTYKSRRRSYHSSLRLSAHRLNSD---SGHKSDTHRSGGRER--GRSKERKHL--------- 2237

  Fly  2456 VAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMIQSTPASPYDQR-RLPTSSDMNG 2519
                |.|:.:..|.:.|                |.....|...:....||.:.| :.|.......
Human  2238 ----LSPDVSRCNSEER----------------GTQADWESPERRQSRSPSEGRSQTPNRQGTGS 2282

  Fly  2520 LAESLIGGVLAAEGLGKYCDSEFVGTAAREMREALDMTPEEMNLAAHQILSNEHSLSLIGSSNGS 2584
            |:||.|..|            ....|..|..|:...:.|:...|.::                  
Human  2283 LSESSIPSV------------SDTSTPRRSRRQLPPVPPKPRPLLSY------------------ 2317

  Fly  2585 IFGGSAGGLGGAGSGGVGGLGGSSSIRNAFGGSGSGPSSLSPQHQPYSGTLNSPPIPDNRLRRVA 2649
                                  ||.||:|  ||.|.|:..|.:..|    |.|..:..|.    |
Human  2318 ----------------------SSLIRHA--GSISPPADGSEEGSP----LTSQALESNN----A 2350

  Fly  2650 TVTTTNNNNKSQVSQNNS 2667
            .:|.::|:...|.||:.|
Human  2351 CLTESSNSPHPQQSQHAS 2368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:459842 153/276 (55%)
Ion_trans 1137..1379 CDD:459842 140/242 (58%)
Ion_trans 1496..1809 CDD:459842 130/320 (41%)
Ion_trans 1851..2126 CDD:459842 144/279 (52%)
GPHH 2135..2188 CDD:465306 28/52 (54%)
Ca_chan_IQ 2198..2273 CDD:462591 31/77 (40%)
CACNA1EXP_016857732.1 Ion_trans 233..507 CDD:459842 153/276 (55%)
Ion_trans 620..859 CDD:459842 140/242 (58%)
Ion_trans 1298..1532 CDD:459842 112/273 (41%)
Ion_trans 1622..1879 CDD:459842 144/279 (52%)
GPHH 1888..1941 CDD:465306 28/52 (54%)
Ca_chan_IQ 1951..2027 CDD:462591 31/76 (41%)
PHA03307 2123..>2345 CDD:223039 55/313 (18%)

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