DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ca-alpha1D and CACNA1D

DIOPT Version :9

Sequence 1:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster
Sequence 2:XP_011532396.1 Gene:CACNA1D / 776 HGNCID:1391 Length:2246 Species:Homo sapiens


Alignment Length:2233 Identity:1137/2233 - (50%)
Similarity:1368/2233 - (61%) Gaps:417/2233 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   680 SGEGDLGGGNNI--------MGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQ-- 734
            ||||.....|:.        ..||:...|...:||:.:...|.|:..|:          ||||  
Human    72 SGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQR----------KRQQYA 126

  Fly   735 ---RRGKPQPDRPQRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDS 796
               ::|.....||.|||||||:.||:|..||.|||||||:..|||.|||||:|||:|.|:|..||
Human   127 KSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDS 191

  Fly   797 NVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMK 861
            |.||..||||||.||:|||.|..:||:|||.:||..||:|||||||||.||::|..|..|.||.|
Human   192 NSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTK 256

  Fly   862 D------------AFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIII 914
            :            .|||||||||||||||||||||||||||||||:||||||.||||||||||||
Human   257 ETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIII 321

  Fly   915 YAIIGLELFSGKLHKAC---RDEITGEYEENIRPC---GVGYQCPP-GYKCYGGWDGPNDGITNF 972
            |||||||||.||:||.|   ..:|..  ||:..||   |.|.||.. |.:|..||.|||.|||||
Human   322 YAIIGLELFIGKMHKTCFFADSDIVA--EEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNF 384

  Fly   973 DNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKE 1037
            |||..||||||||:|:||||||||.:.||||.:..|:||:|:||.|:|||:||:|||||||||||
Human   385 DNFAFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKE 449

  Fly  1038 RNKAKNRGDFQKLREKQQIEEDLRGYLDWITQAEDIEP--DAVGGLISDGKGK-----QPNEMDS 1095
            |.|||.||||||||||||:||||:||||||||||||:|  :..||  .:||..     ...|..:
Human   450 REKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGG--EEGKRNTSMPTSETESVN 512

  Fly  1096 TENLGEEMPEVQMTESR---------WR----------------------KMKKDFDRVNRRMRR 1129
            |||:..|      .|:|         ||                      |:.:.:.|.||..||
Human   513 TENVSGE------GENRGCCGSLWCWWRRRGAAKAGPSGCRRWGQAISKSKLSRRWRRWNRFNRR 571

  Fly  1130 ACRKAVKSQAFYWLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGF 1194
            .||.||||..||||:||||||||..:::|||.|.|||...|:..|...:.|||||||:||||||.
Human   572 RCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGL 636

  Fly  1195 QGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLL 1259
            |.||||||||||||||.|.||||:|....:|.|||:||.|||||||:||||::|.||||||||||
Human   637 QAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLL 701

  Fly  1260 NSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWN 1324
            ||::|||||||||||||:||:|||||:||||||||..:.| |..||.|.|||||||||:||||||
Human   702 NSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTK-RSTFDNFPQALLTVFQILTGEDWN 765

  Fly  1325 AVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDE 1389
            ||||.||.||||.||.|.:.||||||||||||||||||||||||||||||:||:..:|||....|
Human   766 AVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKE 830

  Fly  1390 SAQ---------KKSHSP-TPTIDGMDDHLSIDIDMEQQELDDEDKMDHETLSDEEVREMCEEEE 1444
            ..:         ||::.| ...|...|:.::||...|    :|||| |.....|..|.|..||||
Human   831 RKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYRE----EDEDK-DPYPPCDVPVGEEEEEEE 890

  Fly  1445 EVDEEGMITARPRRMSEVNTATKILPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMF 1509
            |.:.|.....||||:||:|...||.|||.|::||:.|:||..||.||.|.||..|.|:||..||.
Human   891 EDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIML 955

  Fly  1510 SSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDLLVV 1574
            |||.||||:|:|::...|.:|..|||.|||:||:|::||:.::|..||.|||||:.|||||:|||
Human   956 SSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVV 1020

  Fly  1575 CVSLISLVSSSNAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFM 1639
            .|||:|....|:|||||||||||||||||||||||||||||||||.                   
Human  1021 GVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVF------------------- 1066

  Fly  1640 FAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYG 1704
                             |||:||||||:||.|||||||.||||||||||::|||.:|...:||.|
Human  1067 -----------------VAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRG 1114

  Fly  1705 TYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIH 1769
            .:::|.||||..|.:|||.|.|:.|:||:|...|:.|||||||||||.|||.:||||.||.|||:
Human  1115 LFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENIGPIY 1179

  Fly  1770 NFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPVRR 1834
            |.|..::.::||||||:||||:||||||||||||.:||:|||||:||||||.|:|:||||:|:||
Human  1180 NHRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRR 1244

  Fly  1835 YIPKHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEF 1899
            ||||:..|||.|:.|.||.|||.:|:|||:||:.|||:.|.|...:.:.:|.|||:||.||.:|.
Human  1245 YIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEM 1309

  Fly  1900 VFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSE-----------------IKSKDTSQIAEC 1947
            |.|:.||:.|.||.||||.||.:||:||.||:..||                 :.|.....|.|.
Human  1310 VLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADHYFTDAWNTFDALIVVGSVVDIAITEV 1374

  Fly  1948 DIVEG------CKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVA 2006
            :..|.      ..:...|..||.|||.|||||||||||||||:||||||||||||||||||||||
Human  1375 NPTESENVPVPTATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVA 1439

  Fly  2007 LLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQP 2071
            |||.:|||||||:|||:|||:|:...|.|..|||||||.||||:|||.||||||||||::|  .|
Human  1440 LLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLAC--LP 1502

  Fly  2072 DVKCDMNSD-TPGE--PCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHL 2133
            ...||..|| .|||  .|||:.|..||||||:||:||||||||||||||||||||||||||||||
Human  1503 GKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHL 1567

  Fly  2134 DEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFN 2198
            |||.|:||||||:|||||||||||||||:|.||||||||||||:||||||:|||||||||||:||
Human  1568 DEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFN 1632

  Fly  2199 ATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYL 2263
            |||||:|||:|.|||:||::.||.||||.||:|||:|:.|||||||||.| ||||||||||||:|
Human  1633 ATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAG-DDEVTVGKFYATFL 1696

  Fly  2264 IQDYFRRFKKRKEQEGKEGHPDSN-TVTLQAGLRTLHEVSPALKRAISGNLDELDQEPEPMHRRH 2327
            ||||||:|||||||.....:|..| |:.|||||||||::.|.::||||.:|.  |.|||...|..
Human  1697 IQDYFRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPEIRRAISCDLQ--DDEPEETKREE 1759

  Fly  2328 H-TLF---GSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGSASAALGVGGSSLVLGSS----- 2383
            . .:|   |::..:...|.|...|.|.:.|           .:....|.|...|:...|.     
Human  1760 EDDVFKRNGALLGNHVNHVNSDRRDSLQQT-----------NTTHRPLHVQRPSIPPASDTEKPL 1813

  Fly  2384 -DPAGGD-----YLYDTLNRSVADGVNNITRNIMQARLA-----AAGKLQDELQG---------- 2427
             .|||..     :.::::.:.|....|....|...::.|     :.|.|:...:.          
Human  1814 FPPAGNSVCHNHHNHNSIGKQVPTSTNANLNNANMSKAAHGKRPSIGNLEHVSENGHHSSHKHDR 1878

  Fly  2428 -------------------AGSG------------------------GELRTF------------ 2437
                               :.||                        ||...|            
Human  1879 EPQRRSSVKRTRYYETYIRSDSGDEQLPTICREDPEIHGYFRDPHCLGEQEYFSSEECYEDDSSP 1943

  Fly  2438 --------------GESI-SMRPLAKNGGGAATVAGTLPPEANAINYDNR---NRGIL------- 2477
                          |.:| |.||     .|.....|.|..:.:.:.||:|   .|.:|       
Human  1944 TWSRQNYGYYSRYPGRNIDSERP-----RGYHHPQGFLEDDDSPVCYDSRRSPRRRLLPPTPASH 2003

  Fly  2478 --------------------------------LH------------------------------- 2479
                                            ||                               
Human  2004 RRSSFNFECLRRQSSQEEVPSSPIFPHRTALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWAT 2068

  Fly  2480 -----PYNN---VYAP-------------NGALPGHERMI-----------QSTPASPYDQRRLP 2512
                 ||.:   .|.|             ||:||...|..           ..||||    ..:|
Human  2069 PPATPPYRDWTPCYTPLIQVEQSEALDQVNGSLPSLHRSSWYTDEPDISYRTFTPAS----LTVP 2129

  Fly  2513 TS-----SDMNGLAESLIGGVLAAEGLGKYC-DSEFVGTAAREMREALDMTPEEMNLAAHQILSN 2571
            :|     ||....|:||:..||.:||||:|. |.:||.....|:.:|.|:|.:||..||..:|  
Human  2130 SSFRNKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASTLL-- 2192

  Fly  2572 EHSLSLIGSSNGSIFGGSAGGLG 2594
                      ||::...:.|.:|
Human  2193 ----------NGNVRPRANGDVG 2205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:395416 194/293 (66%)
Ion_trans 1137..1379 CDD:395416 179/241 (74%)
Ion_trans 1496..1809 CDD:395416 183/312 (59%)
Ion_trans 1851..2126 CDD:395416 178/300 (59%)
GPHH 2135..2188 CDD:407139 45/52 (87%)
Ca_chan_IQ 2199..2271 CDD:400901 55/71 (77%)
CACNA1DXP_011532396.1 Ion_trans 180..454 CDD:278921 181/275 (66%)
Ion_trans 600..817 CDD:278921 164/217 (76%)
Ion_trans 960..1219 CDD:278921 173/294 (59%)
Ion_trans 1279..1560 CDD:278921 167/282 (59%)
GPHH 1568..1631 CDD:293510 55/62 (89%)
Ca_chan_IQ 1633..1704 CDD:285917 55/71 (77%)
CAC1F_C 1728..2243 CDD:293490 100/512 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 383 1.000 Domainoid score I825
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H578
Inparanoid 1 1.050 1991 1.000 Inparanoid score I55
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48156
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 1 1.000 - - FOG0000179
OrthoInspector 1 1.000 - - otm41149
orthoMCL 1 0.900 - - OOG6_100303
Panther 1 1.100 - - LDO PTHR45628
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 1 1.000 - - X533
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1313.010

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