Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000709.1 | Gene: | CACNA1B / 774 | HGNCID: | 1389 | Length: | 2339 | Species: | Homo sapiens |
Alignment Length: | 2425 | Identity: | 856/2425 - (35%) |
---|---|---|---|
Similarity: | 1156/2425 - (47%) | Gaps: | 598/2425 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 704 ETMNGTTIGPSGAGGQKGGAAAGAAG---------------QKRQQRRG-----KPQPDRP---- 744
Fly 745 -QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEY 808
Fly 809 VFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFR 873
Fly 874 VLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKACRDEITGE 938
Fly 939 YEENIRPCG---VGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQD 1000
Fly 1001 AMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQQIEEDLRGYLD 1065
Fly 1066 WITQAEDI---EPDAVGGLISDGKGKQPNEM---DSTENLGEEMPEVQMTESRWRKM-------- 1116
Fly 1117 -----------KKDFDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLATEHYGQLDWLDNFQ 1170
Fly 1171 EYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRC 1235
Fly 1236 VRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGKEEKY 1300
Fly 1301 RMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLA 1365
Fly 1366 IAVDNLADADSLSEVEKEEEPHDESAQK------------------------------------- 1393
Fly 1394 -----------------------------------------KSHSPTPTI--------------- 1402
Fly 1403 ---------DGMD----DHLSIDIDMEQQELDDEDKMD--------------------------- 1427
Fly 1428 ----------------------------------------------------------------- 1427
Fly 1428 --------------------------HETLSDEEVREMCEEEE----EVDEE------------- 1449
Fly 1450 -----GMITARP-------------------------RRMS----EVNTATKI------------ 1468
Fly 1469 -----------------------------LPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIIL 1504
Fly 1505 CCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLL 1569
Fly 1570 DLLVVCVSLISLV---SSSNAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVL 1631
Fly 1632 VTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSK 1696
Fly 1697 MTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSN 1761
Fly 1762 KENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCDLDKNQRNCIEFA 1826
Fly 1827 LKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNM 1889
Fly 1890 IFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCK 1954
Fly 1955 STKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVV 2019
Fly 2020 GMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGE 2084
Fly 2085 PCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKG 2149
Fly 2150 RIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPL-NSDGTVLFNATLFAVVRTSLSIK- 2212
Fly 2213 ----TDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKK 2273
Fly 2274 RKE--QEGKEGHPDSNTVTLQAGLR-TLHEVSPALKRAISGNLDELDQEPEPMHRRHHTLFGSVW 2335
Fly 2336 SSIRRHGNGTFRRSAKATASQSNGAL---AIGGSASAALGV----------------GGSS-LVL 2380
Fly 2381 GSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAAAGKLQDELQGAGSGGELRTFGESISMRP 2445
Fly 2446 LAKNGGGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMIQSTPASPYDQRR 2510
Fly 2511 LPTSSDMNGLAESLIG-GVLAAEG-LGKYCDSEFVGTAAREMREALDMTPEEMNLAAHQILSNE- 2572
Fly 2573 ---HSLSLIG------------SSNGSIFGGSAGGLGGAGSGGVGG---LGGSSSIRNAFGGSGS 2619
Fly 2620 GPSS-LSPQHQPYSGTLNSPPIPDNRLRRVATVTTTNNNNKSQVSQNNSNSLNVRANANSQMNMS 2683
Fly 2684 PTGQPVQQQS-----PLRGQ 2698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 147/277 (53%) |
Ion_trans | 1137..1379 | CDD:395416 | 138/241 (57%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 126/315 (40%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 149/274 (54%) | ||
GPHH | 2135..2188 | CDD:407139 | 32/52 (62%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 32/76 (42%) | ||
CACNA1B | NP_000709.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..37 | 10/30 (33%) | |
I | 82..359 | 147/281 (52%) | |||
Ion_trans | 112..367 | CDD:278921 | 135/259 (52%) | ||
Binding to the beta subunit. /evidence=ECO:0000250 | 379..396 | 10/16 (63%) | |||
II | 468..712 | 138/246 (56%) | |||
Ion_trans | 499..720 | CDD:278921 | 131/226 (58%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 816..1038 | 18/222 (8%) | |||
DUF3628 | <822..929 | CDD:289100 | 7/107 (7%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1054..1076 | 2/21 (10%) | |||
III | 1137..1419 | 127/320 (40%) | |||
Ion_trans | 1167..1425 | CDD:278921 | 120/296 (41%) | ||
IV | 1456..1711 | 148/280 (53%) | |||
Ion_trans | 1488..1719 | CDD:278921 | 140/256 (55%) | ||
GPHH | 1727..1791 | CDD:293510 | 39/63 (62%) | ||
Ca_chan_IQ | 1793..1867 | CDD:285917 | 32/76 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1916..1968 | 9/51 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1981..2206 | 55/260 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |