Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_075461.2 | Gene: | CACNA1A / 773 | HGNCID: | 1388 | Length: | 2512 | Species: | Homo sapiens |
Alignment Length: | 2561 | Identity: | 850/2561 - (33%) |
---|---|---|---|
Similarity: | 1155/2561 - (45%) | Gaps: | 819/2561 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 676 ARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRGKPQ 740
Fly 741 PDRP----------------QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYT 789
Fly 790 PYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAIST 854
Fly 855 ALSQLMKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIG 919
Fly 920 LELFSGKLHKACRDEITGEYE-ENIRPCGV---GYQCPPGYKCYGGWDGPNDGITNFDNFGLAML 980
Fly 981 TVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRG 1045
Fly 1046 DFQKLREKQQIEEDLRGYLDWITQAEDI---EPDAVGGLISDGKGKQPNE---------MDSTEN 1098
Fly 1099 LGEEMPEVQMTE------------SRWRKMKKD--FDRVNRRMRRACRKAVKSQAFYWLIIVLVF 1149
Fly 1150 LNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSI 1214
Fly 1215 TETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIF 1279
Fly 1280 ALLGMQVFGGKFNFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALA 1344
Fly 1345 CIYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDESA------------------ 1391
Fly 1392 -----------QKKSHSPT---------------------------------------------- 1399
Fly 1400 --------------------------PTID-----------------------------GMD--- 1406
Fly 1407 --------------------DHLSIDIDME----------------------------------- 1416
Fly 1417 ----------------------------------------------------------------- 1416
Fly 1417 ---------------------------------------QQELDDED------------------ 1424
Fly 1425 ----------------------------------------------------------------- 1424
Fly 1425 --------------------KMDHETL----------------------------SDEEVREMCE 1441
Fly 1442 EEEEVDEEGMITARPRRMSEVNTATKILPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCC 1506
Fly 1507 IMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDL 1571
Fly 1572 LVVCVSLISLVSSSNA----ISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLV 1632
Fly 1633 TCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKM 1697
Fly 1698 TQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNK 1762
Fly 1763 ENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCDLDKNQRNCIEFAL 1827
Fly 1828 KAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMI 1890
Fly 1891 FTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKS 1955
Fly 1956 TKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVG 2020
Fly 2021 MQVFGKIALDGGN--------AITANNNFQTFQQAVLVLFRSATGEAWQEIMMSC-SAQPDVKCD 2076
Fly 2077 MNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWS 2141
Fly 2142 EYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVR 2206
Fly 2207 TSLSIK-TDGNID--DANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYF 2268
Fly 2269 RRFKKRKEQEGKEGHPDSNTVTLQAGLRTLHEVSPALKRAISGNLDELDQEPEPMHRRHHTLFGS 2333
Fly 2334 VWSSIRRHGNGTFRRSAKATASQSNGALAIGGSASAALGVGGSSLVLGSSDPAGGDYLYDTLNRS 2398
Fly 2399 VADGVNNITRNIMQARLAAAGKLQDELQGA----------GSGGELRTFGE---SISMRPLAKNG 2450
Fly 2451 GGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMIQSTPASPYDQRRLPTSS 2515
Fly 2516 DMNGLAESLIGGVLAAEGLGKYCDSEFVGTAAREMRE-ALDMTPEEMNLAAHQ------ILSNEH 2573
Fly 2574 SLSLIGSSNGSIFGGSAGGLGGAGSGGVGGLGGSSSIRNAFGGSGSGPSS------------LSP 2626
Fly 2627 QHQPYSGTLNSPPIPDNRLRRVATVTTTNNNNKSQVSQNNSNSLNVRAN---------------A 2676
Fly 2677 NSQMNMSPTGQPVQQQS----PLRGQ 2698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 147/278 (53%) |
Ion_trans | 1137..1379 | CDD:395416 | 145/241 (60%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 131/316 (41%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 145/283 (51%) | ||
GPHH | 2135..2188 | CDD:407139 | 29/52 (56%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 30/74 (41%) | ||
CACNA1A | NP_075461.2 | I | 85..363 | 146/282 (52%) | |
Ion_trans | 115..371 | CDD:278921 | 135/260 (52%) | ||
Binding to the beta subunit. /evidence=ECO:0000250 | 383..400 | 9/16 (56%) | |||
II | 473..717 | 147/246 (60%) | |||
Ion_trans | 504..725 | CDD:278921 | 135/223 (61%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 822..1224 | 27/420 (6%) | |||
III | 1234..1517 | 132/321 (41%) | |||
Ion_trans | 1264..1523 | CDD:278921 | 125/297 (42%) | ||
Ion_trans | 1586..1827 | CDD:278921 | 136/265 (51%) | ||
GPHH | 1835..1898 | CDD:293510 | 34/62 (55%) | ||
Ca_chan_IQ | 1900..1974 | CDD:285917 | 30/74 (41%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1994..2037 | 8/55 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2049..2512 | 66/331 (20%) | |||
polyglutamine repeat | 2319..2331 | ||||
Peptidase_C53 | 2352..>2424 | CDD:283255 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.850 |