Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001375437.1 | Gene: | Scn7a / 64155 | RGDID: | 61922 | Length: | 1680 | Species: | Rattus norvegicus |
Alignment Length: | 1758 | Identity: | 424/1758 - (24%) |
---|---|---|---|
Similarity: | 742/1758 - (42%) | Gaps: | 395/1758 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 747 ALFC-LSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVF 810
Fly 811 LVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAI--STALSQLMKDAFDVKALRAFR 873
Fly 874 VLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKL-HKACR----- 932
Fly 933 -DEI----TGE-----------YEENIR---PCG----VGYQCPPGYKCYGGWDGPNDGITNFDN 974
Fly 975 FGLAMLTVFQCVTLEGWTDVLY-SIQDAMGSDWQWMYFISMVILG---AFFVMNLILGVLSGEFS 1035
Fly 1036 KERNKAKNRG---DFQKLREKQQIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTE 1097
Fly 1098 NLGE-------EMPEVQMTESR------------------WRKMKKDFDRVNRRMRRACRKAVKS 1137
Fly 1138 QAFYWLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLF 1202
Fly 1203 NRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIAS 1267
Fly 1268 LLLLLFLFIVIFALLGMQVFGGKF-----NFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVM 1327
Fly 1328 YVGINAYGGVSSYGALACI-YFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKE-------- 1383
Fly 1384 ----------------------EEPHDESA---------------------------QKKSHSPT 1399
Fly 1400 PTIDGMDDHL------SIDIDMEQQELDDEDKMDHET-------LSDEEVRE------------M 1439
Fly 1440 CEEEEEVDEEGMITARPRRMSEVNTATKILPIPPGTSFFLFSQTNR-------FRVFCHWLCNHS 1497
Fly 1498 NF----GNIILCCIMFSSAMLAAENPLRANDDLNKVLNKF----DYFFTAVFTIELILKLISYGF 1554
Fly 1555 VLHDGAFCRSAFNLLDLLVVCVSLISLVSSS----NAISVVKILRVLRVLRPLRAINRAKGLKHV 1615
Fly 1616 VQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIG 1680
Fly 1681 VQLFKGKFFKCTDGSK---------MTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAK 1736
Fly 1737 GMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVT 1801
Fly 1802 FQNEG-EQEYKNCDL---DKNQRNCIE---FALKAKPVRRYIPKHGIQYKVWWFVTSSSFEYTIF 1859
Fly 1860 ILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIV 1924
Fly 1925 LGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEG-- 1987
Fly 1988 -IRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVL 2051
Fly 2052 FRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGE----PCGS-SIAYPYFISFYVLCSFLIINLFV 2111
Fly 2112 AVIMDNFDYLT----RDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTL---LRKISPPLGF 2169
Fly 2170 GKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKR 2234
Fly 2235 TNP-KLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQ-------EGKEGHPDSNTVTL 2291
Fly 2292 QAG 2294 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 90/309 (29%) |
Ion_trans | 1137..1379 | CDD:395416 | 68/247 (28%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 82/334 (25%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 79/286 (28%) | ||
GPHH | 2135..2188 | CDD:407139 | 16/55 (29%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 14/72 (19%) | ||
Scn7a | NP_001375437.1 | Ion_trans | 117..405 | CDD:395416 | 90/309 (29%) |
Ion_trans | 504..738 | CDD:395416 | 68/247 (28%) | ||
Na_trans_assoc | 742..926 | CDD:399489 | 25/195 (13%) | ||
Ion_trans | 932..1203 | CDD:395416 | 82/334 (25%) | ||
Na_channel_gate | 1194..1245 | CDD:240441 | 11/52 (21%) | ||
Ion_trans | 1249..1496 | CDD:395416 | 77/275 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |