Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005265428.1 | Gene: | SCN10A / 6336 | HGNCID: | 10582 | Length: | 1959 | Species: | Homo sapiens |
Alignment Length: | 2053 | Identity: | 500/2053 - (24%) |
---|---|---|---|
Similarity: | 839/2053 - (40%) | Gaps: | 602/2053 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 746 RALFCLSVKNPLRALCIRI-VEWKP--FEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVE 807
Fly 808 YVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAF 872
Fly 873 RVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKAC-RDEI- 935
Fly 936 ---TGEYEENIRP--------------CGVGY---QCPPGYKCYGGWDGPNDGITNFDNFGLAML 980
Fly 981 TVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKA---- 1041
Fly 1042 ------KNRGDFQKLREKQQI---------------------------------------EEDLR 1061
Fly 1062 ------------GYLDW---------------------ITQAEDIEPDAV---------GG-LIS 1083
Fly 1084 DGKGK----------QPNEMDSTENLGEEMP-----------EVQMTESRWRKMKKDFDRVNR-- 1125
Fly 1126 RMRRA-----------------------CRKAVKSQAFYW------------------------L 1143
Fly 1144 IIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCF 1208
Fly 1209 VVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLF 1273
Fly 1274 LFIVIFALLGMQVFGGKFNFDGK------EEKYRMNFDCFWQALLTVFQIMTGE----DWNAVMY 1328
Fly 1329 VGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHD----- 1388
Fly 1389 ---------------------------------------ESAQKKSHSPTPTIDG---------- 1404
Fly 1405 -MDDH----------LSIDIDMEQQELDD------EDKM----------------------DH-- 1428
Fly 1429 ------------------ETLSDE-------------------------------EVREMCEEEE 1444
Fly 1445 EVDE---EGMITARPRRMSEVNTATKILPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCC 1506
Fly 1507 IMFSSAMLAAEN-PLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLH-DGAFCRSAFNLL 1569
Fly 1570 DLLVVCVSLISL---VSSSNAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVL 1631
Fly 1632 VTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKC---TD 1693
Fly 1694 GS--------KMTQDEC-----YGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVS 1745
Fly 1746 TFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNE----G 1806
Fly 1807 EQEYKNCDLDKNQRNCIEFALKAKPVRRYIPK--HGIQYKVWWFVTSSSFEYTIFILIMINTVTL 1869
Fly 1870 AMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYS 1934
Fly 1935 EIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSF 1999
Fly 2000 QALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEIM 2064
Fly 2065 MSCSAQPDVKCDMN----SDTPGEPCGSSIAYPYFISFYVLCSFLI-INLFVAVIMDNFDYLTRD 2124
Fly 2125 -WSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMP 2188
Fly 2189 LNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEV 2253
Fly 2254 TVGKFYATYLIQDYFRRFKK--RKEQEGKEGHPDSNTVTLQAGLRT--LHEV-----SPALKRAI 2309
Fly 2310 SGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGSASAALGVG 2374
Fly 2375 GSSLVLGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQ 2412 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 96/308 (31%) |
Ion_trans | 1137..1379 | CDD:395416 | 76/275 (28%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 101/337 (30%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 92/280 (33%) | ||
GPHH | 2135..2188 | CDD:407139 | 14/52 (27%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 13/71 (18%) | ||
SCN10A | XP_005265428.1 | Ion_trans | 150..410 | CDD:278921 | 88/278 (32%) |
Na_trans_cytopl | 466..>537 | CDD:288761 | 7/70 (10%) | ||
Ion_trans | 685..897 | CDD:278921 | 69/226 (31%) | ||
Na_trans_assoc | 907..1150 | CDD:284034 | 33/255 (13%) | ||
Ion_trans | 1172..1430 | CDD:278921 | 93/314 (30%) | ||
Na_channel_gate | 1422..1474 | CDD:240441 | 11/52 (21%) | ||
Ion_trans | 1496..1735 | CDD:278921 | 85/260 (33%) | ||
GPHH | 1745..1802 | CDD:293510 | 17/61 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |