Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335317.1 | Gene: | cacna1ab / 569528 | ZFINID: | ZDB-GENE-090514-3 | Length: | 2336 | Species: | Danio rerio |
Alignment Length: | 2377 | Identity: | 848/2377 - (35%) |
---|---|---|---|
Similarity: | 1175/2377 - (49%) | Gaps: | 544/2377 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 676 ARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQ--RRGK 738
Fly 739 ------PQPDRP-----QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYP 792
Fly 793 GSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALS 857
Fly 858 QLMKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLEL 922
Fly 923 FSGKLHKACRDEITGE-YEENIRPCGVGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCV 986
Fly 987 TLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLR 1051
Fly 1052 EKQQIEEDLRGYLDWITQAEDI---EPDAVGG-----LISDGKGKQPNEMDSTENLGEEM--PEV 1106
Fly 1107 QMTESRWRKMKKD---FDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLATEHYGQLDWLDN 1168
Fly 1169 FQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPP---LGV 1230
Fly 1231 SVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFD- 1294
Fly 1295 GKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYIL 1359
Fly 1360 LNVFLAIAVDNLADADSLSEVEKEEEPHDESAQKKSHSPTPTIDGMDD----HLSIDIDMEQQ-- 1418
Fly 1419 ----------------------------ELDDED--KMDHETLSD-------------------- 1433
Fly 1434 ---------------EE-----------------------------VREMCEEEEEVDEEG---- 1450
Fly 1451 ----------------------------------------------------------------- 1450
Fly 1451 -------MITARP-------------------RRMSEV--------------------------- 1462
Fly 1463 -----------------NTATKILP---------------------------------------- 1470
Fly 1471 -IPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKVLNKFD 1534
Fly 1535 YFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSS--------NAISVV 1591
Fly 1592 KILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVV 1656
Fly 1657 VAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYD-DGDVHKPRLR 1720
Fly 1721 EREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIII 1785
Fly 1786 IAFFMVNIFVGFVIVTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIP--KHGIQYKVWWF 1848
Fly 1849 VTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFG 1913
Fly 1914 DAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRL 1978
Fly 1979 VKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQT 2043
Fly 2044 FQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIIN 2108
Fly 2109 LFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLC 2173
Fly 2174 PHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIK-TDGNID--DANSELRATIKQIWKRT 2235
Fly 2236 NPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEGHPDSNTVTLQAGLRTLHE 2300
Fly 2301 VSPALKR----AISGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQSNGAL 2361
Fly 2362 AIGGSASAALGVGGSSLVLGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAAAGKLQDELQ 2426
Fly 2427 GAGSGGELRTFGESISMRPLAKN---------GGGAATVAGTLP--PEANAINYDNRNRGILLHP 2480
Fly 2481 YNNVYAPNGALPGHERMIQSTPASPYDQRRLPTSSDMNGLAESLIGGVLAAEGLGKYCDSEF-VG 2544
Fly 2545 TAAREMREALDMTPEEMNL---AAHQILSNEHSLSLIGSSNGSIFG-----------GSAGGLGG 2595
Fly 2596 AGSGGVGGLGGSSSIRNAFGGSGSGPSSLSPQHQPYSGTLNSPPIPDNRLRRVATVTTTNNNNKS 2660
Fly 2661 QVSQNNSNSLNVRANANSQMNMSPTG-QPVQQQSPLR 2696 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 148/275 (54%) |
Ion_trans | 1137..1379 | CDD:395416 | 144/245 (59%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 130/321 (40%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 137/274 (50%) | ||
GPHH | 2135..2188 | CDD:407139 | 32/52 (62%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 29/74 (39%) | ||
cacna1ab | XP_021335317.1 | Ion_trans | 91..360 | CDD:306908 | 148/275 (54%) |
Ion_trans | 465..703 | CDD:306908 | 144/244 (59%) | ||
Ion_trans | 1099..1335 | CDD:306908 | 111/274 (41%) | ||
Ion_trans | 1425..1672 | CDD:306908 | 137/274 (50%) | ||
GPHH | 1673..1743 | CDD:318993 | 44/69 (64%) | ||
Ca_chan_IQ | 1745..1820 | CDD:312334 | 29/74 (39%) | ||
Herpes_ICP4_C | 1841..>2243 | CDD:332854 | 77/428 (18%) | ||
PAT1 | <2144..2300 | CDD:330585 | 13/62 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |