Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038935723.1 | Gene: | Cacna1i / 56827 | RGDID: | 68944 | Length: | 2226 | Species: | Rattus norvegicus |
Alignment Length: | 2368 | Identity: | 583/2368 - (24%) |
---|---|---|---|
Similarity: | 906/2368 - (38%) | Gaps: | 790/2368 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 739 PQPDRPQRALFCLSVKNPLRALCIRIV--EWKPFEFLILLTIFANCIALAVYTPYPG----SDSN 797
Fly 798 VTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKD 862
Fly 863 AFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKL 927
Fly 928 HKAC----------------------RDE------ITGEYEENIRPCGVGYQCPP----GYKC-- 958
Fly 959 -------YG-------------GWD-----------GPNDGITNFDNFGLAMLTVFQCVTLEGWT 992
Fly 993 DVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFS--KER----------------- 1038
Fly 1039 ----------------------NKAKNR--GDFQKLREKQQ------------------------ 1055
Fly 1056 -------------IEEDLRGYLDWITQAED------------IEPDAVGGLIS------------ 1083
Fly 1084 ---DGKGKQPNEMDSTENLGEEMPE----VQMTESRWRKMKKDFDRVNRRMRRACRKAVKSQAFY 1141
Fly 1142 WLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFD 1206
Fly 1207 CFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLL 1271
Fly 1272 LFLFIVIFALLGMQVFGGKFNF---DGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINA 1333
Fly 1334 YGGVSSYGALACIYFIILFICGNYILLNVFLAIAVD----------NLADAD----SLSEVEKEE 1384
Fly 1385 EPHDES----------------------------------AQKKSHSPTPTIDGMDDHLSIDIDM 1415
Fly 1416 EQQ-------------------------------------------------------------- 1418
Fly 1419 ------------------------------------ELDDEDKMD-------------------- 1427
Fly 1428 ----HETLSD-------------EEVREMCEEEEEVDEEGMITARPRRMSEVNTATKILP----I 1471
Fly 1472 PPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENP-LRANDDLNKVLNKFDY 1535
Fly 1536 FFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSS------SNAISVVKIL 1594
Fly 1595 RVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAI 1659
Fly 1660 KTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKC--TDGSKMT-QDECYGTYLVYDDGDVHKPRLRE 1721
Fly 1722 REWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIII 1786
Fly 1787 AFFMVNIFVGFVIVTF----QNEGEQEYKNCD------LDKNQRNCIEFALKAKPVRRYIPKHGI 1841
Fly 1842 QYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAF 1906
Fly 1907 RFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFR 1971
Fly 1972 LFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYV---ALLIVLLFFIYAVVGMQVFGKIALDGGN 2033
Fly 2034 ---AITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGEPCGSSIAYP-- 2093
Fly 2094 -YFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEY-------------- 2143
Fly 2144 ---------------DPDAKGR---------------IKH----------LDVVTLLRKIS---- 2164
Fly 2165 ----------------PPLGFGKLCPHRMACKRLVSMNMP------------------------- 2188
Fly 2189 ---LNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPP--- 2247
Fly 2248 --GNDDE---------VTVGKFYATYL----------IQDYFRRFKKRKEQEGKEGHPDSNTVTL 2291
Fly 2292 QAGLRTLHEVSPALKRAISGNLDELDQEPE------PMHRRHHTLFGSVWSSIRRHG-NGTFRRS 2349
Fly 2350 A-------KATASQSNG--------ALAIGGSASAALG----VGGSSLVLGSSDPAGGDYLYDTL 2395
Fly 2396 NRSVADGVNNITRNIMQARLAAAGKLQDELQGAGSGGELRTFGESI--------SMRPLAKNGGG 2452
Fly 2453 AATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMIQST---------PASPYDQ 2508
Fly 2509 R---RLPT-----SSDMNGLAESLIGGV 2528 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 104/384 (27%) |
Ion_trans | 1137..1379 | CDD:395416 | 93/258 (36%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 98/326 (30%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 97/283 (34%) | ||
GPHH | 2135..2188 | CDD:407139 | 19/126 (15%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 14/95 (15%) | ||
Cacna1i | XP_038935723.1 | Ion_trans | 76..407 | CDD:395416 | 103/345 (30%) |
Ion_trans | 597..824 | CDD:395416 | 90/237 (38%) | ||
Ion_trans | 1128..1400 | CDD:395416 | 98/322 (30%) | ||
Ion_trans | 1445..1700 | CDD:395416 | 97/285 (34%) | ||
PHA03307 | 1833..>2066 | CDD:223039 | 54/275 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |