Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021330047.1 | Gene: | cacna1aa / 562059 | ZFINID: | ZDB-GENE-040724-26 | Length: | 2371 | Species: | Danio rerio |
Alignment Length: | 2449 | Identity: | 845/2449 - (34%) |
---|---|---|---|
Similarity: | 1160/2449 - (47%) | Gaps: | 664/2449 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 676 ARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRGKPQ 740
Fly 741 PDRP----------------QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYT 789
Fly 790 PYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAIST 854
Fly 855 ALSQLMKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIG 919
Fly 920 LELFSGKLHKACRDEITGEYEENIRPCGVGYQ---CPPGYKCYGGWDGPNDGITNFDNFGLAMLT 981
Fly 982 VFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGD 1046
Fly 1047 FQKLREKQQIEEDLRGYLDWITQAEDI-------EPDAVGGLISDGKGKQP----------NEMD 1094
Fly 1095 STENLGEEMPEVQMTESRWRKMKKDFDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLATEH 1159
Fly 1160 YGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGM 1224
Fly 1225 MPP---LGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQV 1286
Fly 1287 FGGKFNFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIIL 1351
Fly 1352 FICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDESAQKK----------SHSP-------- 1398
Fly 1399 ---TPTIDGMD--DHLSIDIDMEQQ--------------------------------ELDDEDK- 1425
Fly 1426 ---------------MDHETLSD------------------------------------------ 1433
Fly 1434 -------------------------EEVREM---------------------------------- 1439
Fly 1440 -------CE--------------EEEEVDEEG---------------MITARP------RRMSE- 1461
Fly 1462 -----------------------VNTA--------------------------TKI--------- 1468
Fly 1469 -----------------------------------------------LPIPPGTSFFLFSQTNRF 1486
Fly 1487 RVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLIS 1551
Fly 1552 YGFVLHDGAFCRSAFNLLDLLVVCVSLISLV--------SSSNAISVVKILRVLRVLRPLRAINR 1608
Fly 1609 AKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQ 1673
Fly 1674 FMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYD-DGDVHKPRLREREWSNNRFHFDDVAKG 1737
Fly 1738 MLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTF 1802
Fly 1803 QNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIFILIMIN 1865
Fly 1866 TVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFID 1930
Fly 1931 IVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTF 1995
Fly 1996 IKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALD--GGNAITANNNFQTFQQAVLVLFRSATGE 2058
Fly 2059 AWQEIMMSCSAQPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTR 2123
Fly 2124 DWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMP 2188
Fly 2189 LNSDGTVLFNATLFAVVRTSLSIKT----DGNID--DANSELRATIKQIWKRTNPKLLDQVVPPP 2247
Fly 2248 GNDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEGHPDSNTVTLQAGLRTLHEVSPALKRAISGN 2312
Fly 2313 LDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGSASAALGVGGSS 2377
Fly 2378 LVLGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAAAGKLQDELQGAGSGGELRTFGESIS 2442
Fly 2443 MRPLAKNG-------------GGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAP------- 2487
Fly 2488 --NGALPGHERMIQSTPASPYDQRR-LPTSSDMNGLAESLIGGVLAAEGLGKYCDSEF-VGTAAR 2548
Fly 2549 EMREALDMTPEEMNLAA-------------HQILSNEHSLSLIGSSNGSIFGGSAGGLGGAGSGG 2600
Fly 2601 VGGLGGSSSIRNAFGGSGSGPS----SLSPQ-------HQPYSGTLNSPPIPDNRLRRVATVTTT 2654
Fly 2655 NNNNKSQVSQNNSNSLNVRANANSQMNMSPTGQPVQQQSPLRGQ 2698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 153/277 (55%) |
Ion_trans | 1137..1379 | CDD:395416 | 140/244 (57%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 130/321 (40%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 143/276 (52%) | ||
GPHH | 2135..2188 | CDD:407139 | 32/52 (62%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 29/77 (38%) | ||
cacna1aa | XP_021330047.1 | Ion_trans | 90..362 | CDD:306908 | 153/277 (55%) |
Ion_trans | 471..709 | CDD:306908 | 140/243 (58%) | ||
Ion_trans | 1141..1377 | CDD:306908 | 111/274 (41%) | ||
Ion_trans | 1467..1719 | CDD:306908 | 143/276 (52%) | ||
GPHH | 1720..1790 | CDD:318993 | 44/69 (64%) | ||
Ca_chan_IQ | 1792..1870 | CDD:312334 | 29/77 (38%) | ||
SOBP | <2151..2361 | CDD:317654 | 17/83 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |