Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021330381.1 | Gene: | cacna1ha / 560875 | ZFINID: | ZDB-GENE-130103-1 | Length: | 2198 | Species: | Danio rerio |
Alignment Length: | 2407 | Identity: | 558/2407 - (23%) |
---|---|---|---|
Similarity: | 929/2407 - (38%) | Gaps: | 824/2407 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 775 LLTIFANCIALAVYTPYPG----SDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYL 835
Fly 836 RNGWNLLDFTIVVIGAISTALSQLMKDAFD--VKALRAFRVLRPLRLVSGVPSLQVVLNSILKAM 898
Fly 899 VPLFHIALLVLFVIIIYAIIGLELFSGKLHKAC------RDEITGEY----------EEN----- 942
Fly 943 ------IRPCGVGYQCPP---GYKC----------YGGWDG----------------------PN 966
Fly 967 DGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLS 1031
Fly 1032 GEF--SKER----------------------------------------NKAKNR-----GDFQK 1049
Fly 1050 LREKQQIEEDL------------RGYLDWITQAEDI----------------------------- 1073
Fly 1074 --------------EPDAVGGLISDGKG----------KQPNEMDSTE---------NLGEEMPE 1105
Fly 1106 V------------QMTESRWR-------KMKKDFDRVNRRM------------------------ 1127
Fly 1128 ---------------------------------------------------------------RR 1129
Fly 1130 ACRKAVKSQAFYWLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGF 1194
Fly 1195 QGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLL 1259
Fly 1260 NSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNF---DGKEEKYRMNFDCFWQALLTVFQIMTGE 1321
Fly 1322 DWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVD--------NLADAD--- 1375
Fly 1376 -SLSEVEKEEEPHDESAQKKSHS------------------------------------PTP--- 1400
Fly 1401 ---------TIDGMDDHLSIDID-MEQQELD---------------------------------- 1421
Fly 1422 -------------------DEDKMDHETLSD--------------EEVREMCE------------ 1441
Fly 1442 --------EEEEVDEEGMITARPRRMSEVNTATKILPIPPGT------SFFLFSQTNRFRVFCHW 1492
Fly 1493 LCNHSNFGNIILCCIMFSSAMLAAENP-LRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVL 1556
Fly 1557 HDGAFCRSAFNLLDLLVVCVSLI----SLVSSSNAI-SVVKILRVLRVLRPLRAINRAKGLKHVV 1616
Fly 1617 QCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGV 1681
Fly 1682 QLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVST 1746
Fly 1747 FEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTF----QNEGE 1807
Fly 1808 QEYKNCDL------DKNQR---NCIEFALKA------KPVRRYIPKHGIQYKVWWFVTSSSFEYT 1857
Fly 1858 IFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFI 1922
Fly 1923 IVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEG 1987
Fly 1988 IRTLLWTFIKSFQALPYV---ALLIVLLFFIYAVVGMQVFGKIALDGGN---AITANNNFQTFQQ 2046
Fly 2047 AVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGE-PCGSSIAYP---YFISFYVLCSFLII 2107
Fly 2108 NLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKI--------- 2163
Fly 2164 --------------SPPLGFGK-------LCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRT 2207
Fly 2208 SLS------IKTD------GNIDDANSELRATIKQI-------WKRTN--PKLLDQVVPPPGNDD 2251
Fly 2252 EVTVGKFYATYLIQDYFRRFKKRKEQEGKEGHPDS-NTVTLQAGLRT----LH--------EVSP 2303
Fly 2304 ALKRAISGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGSAS 2368
Fly 2369 AALGVGGSSLVLGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAAAGKLQDELQGAGSGGE 2433
Fly 2434 LRTFGESISMRPL-AKNGGGAATVAGTLPPEANAINYDNRNRGILLHPYNN----------VYAP 2487
Fly 2488 NGALPGHE-----------------RMIQSTP-----ASPYDQRRLPTSSDMNGLAESLIGGVLA 2530
Fly 2531 AEGLGKYCDSEFVGTAAREMREALDMTPEEMNLAAHQILSNE----HSLSLIGSSNGSIFGGSAG 2591
Fly 2592 GL 2593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 103/376 (27%) |
Ion_trans | 1137..1379 | CDD:395416 | 90/256 (35%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 97/322 (30%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 91/284 (32%) | ||
GPHH | 2135..2188 | CDD:407139 | 15/82 (18%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 16/92 (17%) | ||
cacna1ha | XP_021330381.1 | Ion_trans | 1..323 | CDD:306908 | 102/334 (31%) |
Ion_trans | 644..871 | CDD:306908 | 86/237 (36%) | ||
Ion_trans | 1143..1413 | CDD:306908 | 96/319 (30%) | ||
Ion_trans | 1464..1695 | CDD:306908 | 87/269 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |