Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009299772.1 | Gene: | cacna1ba / 555941 | ZFINID: | ZDB-GENE-060531-44 | Length: | 2378 | Species: | Danio rerio |
Alignment Length: | 2492 | Identity: | 847/2492 - (33%) |
---|---|---|---|
Similarity: | 1178/2492 - (47%) | Gaps: | 673/2492 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 713 PSGAGGQKGGAAAGAAGQKRQQRRGKPQPDR---------------------------PQRALFC 750
Fly 751 LSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFT 815
Fly 816 AECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLRPLRL 880
Fly 881 VSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKACRDEITGEYEENIRP 945
Fly 946 CGV---GYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQ 1007
Fly 1008 WMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQQIEEDLRGYLDWITQAED 1072
Fly 1073 I----------EPDAVGGLISDGKGKQPNEMDSTENLGEE--MPEVQMTESRWRKMKKD------ 1119
Fly 1120 ---------------------------------FDRVNRRMRRACRKAVKSQAFYWLIIVLVFLN 1151
Fly 1152 TGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITE 1216
Fly 1217 TLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFAL 1281
Fly 1282 LGMQVFGGKFNFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACI 1346
Fly 1347 YFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDESAQKK----------------- 1394
Fly 1395 ------------------------SHSP------------------------------------- 1398
Fly 1399 -----------------------TPTIDG-MDDHLSIDIDMEQQELDDE---------------- 1423
Fly 1424 -----------DKMDHET-------------------LSDEEVREMCEE---------------- 1442
Fly 1443 -EEEVDE---------------------EGMITA------------------------------- 1454
Fly 1455 -------RPRR------------------------------------------------------ 1458
Fly 1459 -------------------------------------------MSEVN----TATKILPIPPGTS 1476
Fly 1477 FFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVF 1541
Fly 1542 TIELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSS--------------NAISVVK 1592
Fly 1593 ILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVV 1657
Fly 1658 AIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLRER 1722
Fly 1723 EWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIA 1787
Fly 1788 FFMVNIFVGFVIVTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIPKH--GIQYKVWWFVT 1850
Fly 1851 SSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDA 1915
Fly 1916 WNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVK 1980
Fly 1981 LLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQ 2045
Fly 2046 QAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLF 2110
Fly 2111 VAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPH 2175
Fly 2176 RMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIK-TDGNIDD--ANSELRATIKQIWKRTNP 2237
Fly 2238 KLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRK----EQEGKEGHPDSNTVTLQAGLRTL 2298
Fly 2299 HEVSPALK----------RAISG--NLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAK 2351
Fly 2352 ATAS-QSNGALAIGGSASAALGVGGSSLVLGSSDPAGGDYLYDTLN-RSVADGVNNITRNIM--Q 2412
Fly 2413 ARLAAAGKLQDELQGAGSGGELRTFGESISMRPLAKNGGGAATVAGTLPPEANAINY-------- 2469
Fly 2470 -----------------DNRNRGILLHPYNNVYAPNGALPGHERMIQSTPASPYDQRRLPTSSDM 2517
Fly 2518 NGLAESLIGGVLAAEGLGKYCDSEFVGTAAREMREALDMTPEEMNLAAHQILSNEH--SLSLIGS 2580
Fly 2581 SNGSIFGGSAGGLGGAGSGGVGG------LGGSSSIRNAFGGSGSGPSS-LSPQHQPYSGTLNSP 2638
Fly 2639 PIPDNRLRRVATVTT------------TNNNNKSQVSQNNSNSLNVRANANSQMNMSPTGQPV-- 2689
Fly 2690 ---------QQQSPLRGQGNQT 2702 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 142/277 (51%) |
Ion_trans | 1137..1379 | CDD:395416 | 139/241 (58%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 130/326 (40%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 145/274 (53%) | ||
GPHH | 2135..2188 | CDD:407139 | 34/52 (65%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 26/74 (35%) | ||
cacna1ba | XP_009299772.1 | Ion_trans | 132..361 | CDD:278921 | 125/234 (53%) |
Ion_trans | 517..738 | CDD:278921 | 132/226 (58%) | ||
Ion_trans | 1192..1416 | CDD:278921 | 106/262 (40%) | ||
Ion_trans | 1524..1757 | CDD:278921 | 135/256 (53%) | ||
GPHH | 1765..1828 | CDD:293510 | 39/62 (63%) | ||
Ca_chan_IQ | 1830..1904 | CDD:285917 | 26/74 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |