Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031751845.1 | Gene: | scn8a / 549640 | XenbaseID: | XB-GENE-1011299 | Length: | 1987 | Species: | Xenopus tropicalis |
Alignment Length: | 1969 | Identity: | 477/1969 - (24%) |
---|---|---|---|
Similarity: | 837/1969 - (42%) | Gaps: | 560/1969 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 747 ALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFL 811
Fly 812 VIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLR 876
Fly 877 PLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKAC------RDEI 935
Fly 936 ----------TGEYEEN----------IRP--CGVGY---QCPPGYKCYGGWDGPNDGITNFDNF 975
Fly 976 GLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVL---------- 1030
Fly 1031 -------------------------------------------------------SGEFSKERNK 1040
Fly 1041 -AKNRGDFQKLREKQQIEE-DLRGYLDWITQAEDIE---------PD---------------AVG 1079
Fly 1080 G-----------------------------------LISDGKGKQP------------NEMDS-- 1095
Fly 1096 ---------TENL----------------------------GEEMPEV----------------- 1106
Fly 1107 -------------QMTESRWRK------------MKKDFDRVNRRMRRACRKAVKSQAFY----- 1141
Fly 1142 WL------------------IIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLK 1188
Fly 1189 MYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSN 1253
Fly 1254 LVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGKEEKYRMNFDC---------FWQ 1309
Fly 1310 ALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAI-----AVD 1369
Fly 1370 NLADAD----------SLSEVEK-----------------------EEEPHDESAQKKSH----- 1396
Fly 1397 -------------SPTPTIDGM----------DDHLSI---------------DIDMEQQELDD- 1422
Fly 1423 ---------EDKMDHETLSDE----EVREMCEE------EEEVDEEGMIT----ARPRRMSEVNT 1464
Fly 1465 ATKILPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENP-LRANDDLNK 1528
Fly 1529 VLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSS---NAISV 1590
Fly 1591 VKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCV 1655
Fly 1656 VVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKC----TDGSKMTQD-----ECYGTYLVYDD 1711
Fly 1712 GDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVA 1776
Fly 1777 AYYIIYIIIIAFFMVNIFVGFVIVTFQNE----GEQEYKNCDLDKNQRNCIEFALKAKPVRRYIP 1837
Fly 1838 K--HGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFV 1900
Fly 1901 FKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLI 1965
Fly 1966 SINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALD 2030
Fly 2031 GGNAITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGE----PCGS-SI 2090
Fly 2091 AYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWS-ILGPHHLDEFIRLWSEYDPDAKGRIKHL 2154
Fly 2155 DVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGNIDD 2219
Fly 2220 ANSELRATIKQIWKRTNPKLL--DQVVPPPGNDDE----VTVGKFYATYLIQDYFRRFKKRKEQE 2278
Fly 2279 G-----------KEGHPDS 2286 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 96/371 (26%) |
Ion_trans | 1137..1379 | CDD:395416 | 86/288 (30%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 97/329 (29%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 79/279 (28%) | ||
GPHH | 2135..2188 | CDD:407139 | 13/52 (25%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 15/77 (19%) | ||
scn8a | XP_031751845.1 | Ion_trans | 131..421 | CDD:395416 | 90/304 (30%) |
Na_trans_cytopl | 503..709 | CDD:403218 | 20/205 (10%) | ||
Ion_trans | 759..972 | CDD:395416 | 72/227 (32%) | ||
Na_trans_assoc | 998..1199 | CDD:399489 | 34/213 (16%) | ||
Ion_trans | 1204..1480 | CDD:395416 | 96/324 (30%) | ||
Na_channel_gate | 1472..1524 | CDD:240441 | 10/52 (19%) | ||
Ion_trans | 1529..1783 | CDD:395416 | 79/277 (29%) | ||
GPHH | 1795..1842 | CDD:407139 | 13/51 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |