Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038946935.1 | Gene: | Cacna1e / 54234 | RGDID: | 2246 | Length: | 2465 | Species: | Rattus norvegicus |
Alignment Length: | 2603 | Identity: | 871/2603 - (33%) |
---|---|---|---|
Similarity: | 1192/2603 - (45%) | Gaps: | 747/2603 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 586 IDEQEQQHDQGDSAEEEDDDEDV--------------DEYFEEEEDDTQAF----------SPFY 626
Fly 627 SSSAELIDNFGGGAGKFFNIM-----------------DFERGASGEGGFSPNGNGGPGSGDVSR 674
Fly 675 TARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRG-- 737
Fly 738 ---KPQPDRP-----QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGS 794
Fly 795 DSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQL 859
Fly 860 MKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFS 924
Fly 925 GKLHKACRDEITGEYE--ENIRPCGVGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVT 987
Fly 988 LEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLRE 1052
Fly 1053 KQQIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTENLGEEMPEVQMTESRWRKMK 1117
Fly 1118 KD-------------------------------FDRVNRRMRRACRKAVKSQAFYWLIIVLVFLN 1151
Fly 1152 TGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITE 1216
Fly 1217 TLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFAL 1281
Fly 1282 LGMQVFGGKFNF-DGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALAC 1345
Fly 1346 IYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEE-----------------------PH 1387
Fly 1388 DESAQKKSH-------------------------------------------------------- 1396
Fly 1397 ----SP-----------------------------------------------TPTIDGMDDHLS 1410
Fly 1411 I--------------DIDMEQQE------------------------------------------ 1419
Fly 1420 -------LDD----EDKMDHETLSDEEVREMCEEEEE----------------------VDE--- 1448
Fly 1449 ----------------------EG---------------------------MITARPRRMSEVNT 1464
Fly 1465 ATKILP---------------------------------------------------IPPGTSFF 1478
Fly 1479 LFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTI 1543
Fly 1544 ELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNA--------ISVVKILRVLRVL 1600
Fly 1601 RPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNI 1665
Fly 1666 MLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFH 1730
Fly 1731 FDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFV 1795
Fly 1796 GFVIVTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTI 1858
Fly 1859 FILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFII 1923
Fly 1924 VLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGI 1988
Fly 1989 RTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFR 2053
Fly 2054 SATGEAWQEIMMSCSAQPDVKCDMNSDTP-----GEPCGSSIAYPYFISFYVLCSFLIINLFVAV 2113
Fly 2114 IMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMA 2178
Fly 2179 CKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIK-TDGNID--DANSELRATIKQIWKRTNPKLL 2240
Fly 2241 DQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEGHPD-----------------SNT 2288
Fly 2289 VTL-------------QAGLRTLHEVSP-------ALKRAISGNLDEL-----DQEPEPMHRRHH 2328
Fly 2329 TLFGSVWSSIRRHG----------NGTFRRSAKATASQSNGALAIGGSASAALGV-----GGSSL 2378
Fly 2379 VLGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAA------AGKLQDELQGAGSGGELRTF 2437
Fly 2438 GESISMRPLAKNGGGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMIQSTP 2502
Fly 2503 ASPYDQR-RLPTSSDMNGLAESLIGGVLAAEGLGKYCDSEFVGTAAREMREALDMTPEEMNLAAH 2566
Fly 2567 QILSNEHSLSLIGSSNGSIFGGSAGGLGGAGSGGVGG-------LGGSSSIRNAFGGS-----GS 2619
Fly 2620 GPSSLSPQH---QPY------------------------------SGTLNSPP-------IPDNR 2644
Fly 2645 LRR 2647 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 153/276 (55%) |
Ion_trans | 1137..1379 | CDD:395416 | 139/242 (57%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 130/320 (41%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 144/279 (52%) | ||
GPHH | 2135..2188 | CDD:407139 | 28/52 (54%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 31/74 (42%) | ||
Cacna1e | XP_038946935.1 | Ion_trans | 235..509 | CDD:395416 | 153/276 (55%) |
Ion_trans | 622..861 | CDD:395416 | 139/242 (57%) | ||
Ion_trans | 1301..1535 | CDD:395416 | 112/273 (41%) | ||
Ion_trans | 1625..1882 | CDD:395416 | 144/279 (52%) | ||
GPHH | 1891..1944 | CDD:407139 | 28/52 (54%) | ||
Ca_chan_IQ | 1955..2028 | CDD:400901 | 31/73 (42%) | ||
Atrophin-1 | 2170..>2429 | CDD:397323 | 58/334 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |