DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ca-alpha1D and para

DIOPT Version :9

Sequence 1:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster
Sequence 2:NP_001259619.1 Gene:para / 32619 FlyBaseID:FBgn0285944 Length:2145 Species:Drosophila melanogaster


Alignment Length:2393 Identity:525/2393 - (21%)
Similarity:892/2393 - (37%) Gaps:816/2393 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   551 ITEEDD--DEDENADYGDFDRE---------------DQELDDEEPEGTTIDIDEQEQQHDQGDS 598
            :||:.|  .|:|.:.:..|.||               .:||:.:..||.......:::|      
  Fly     1 MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQ------ 59

  Fly   599 AEEEDDDEDVDEYFEEEEDDT------------QAFSP-FYSSSAELIDNFGGGAGKFFNIMDFE 650
            .|...||||.||  ..:.|.|            .:|.| ..|:..|.||.:      :.|::.|.
  Fly    60 KEIRYDDEDEDE--GPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPY------YSNVLTFV 116

  Fly   651 RGASGEGGFSPNGNGGPGSGDVSRTARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSG 715
            ..:.|:              |:.|.:                                       
  Fly   117 VVSKGK--------------DIFRFS--------------------------------------- 128

  Fly   716 AGGQKGGAAAGAAGQKRQQRRGKPQPDRPQRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFA 780
                                        ..:|::.|...||:|.:.|.|:....|...|:.||..
  Fly   129 ----------------------------ASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILV 165

  Fly   781 NCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFT 845
            |||.:.:          .|..|:|..|.:|..|:|.|..:|::|.||:|....|||:.||.|||.
  Fly   166 NCILMIM----------PTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFV 220

  Fly   846 IVVIGAISTALSQLMKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLF 910
            ::.:..::..:     |..::.|||.|||||.|:.|:.||.|:.::.::::::..|..:.:|.:|
  Fly   221 VIALAYVTMGI-----DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMF 280

  Fly   911 VIIIYAIIGLELFSGKLHKACRDE---------ITGE------------YEE----------NIR 944
            .:.::|::||:::.|.|.:.|..:         :|.|            |.|          ||.
  Fly   281 SLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNIS 345

  Fly   945 PCGVGYQCPPGYKCYGGW-DGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQW 1008
            ..|   ||...|.|..|: ..||.|.|:||:||.|.|:.|:.:|.:.|.| ||.:.......|..
  Fly   346 GAG---QCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED-LYQLVLRAAGPWHM 406

  Fly  1009 MYFISMVILGAFFVMNLILGVLSGEFSKERNKAK------------------------------- 1042
            ::||.::.||:|:::||||.:::..:.:.:.||:                               
  Fly   407 LFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANAQ 471

  Fly  1043 ------------------------------------NRGDFQKLREKQQIE-------------- 1057
                                                .:|:....:||..|.              
  Fly   472 AQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQR 536

  Fly  1058 ----------------------------------------------------------------E 1058
                                                                            :
  Fly   537 QPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQ 601

  Fly  1059 DLRGYLDWITQAEDIEP-------------------------------------DAVGGLISDGK 1086
            |.:.:|.:...:..:.|                                     |.:||:...|.
  Fly   602 DAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGV 666

  Fly  1087 GKQPNE-------------------------------------MDSTENLGE----EMPEVQMTE 1110
            .....|                                     ::.|:..|:    :.|.::..:
  Fly   667 STMTKESKLRNRNTRNQSVGATNGGTTCLDTNHKLDHRDYEIGLECTDEAGKIKHHDNPFIEPVQ 731

  Fly  1111 SRWRKMKKD-------FDRVNRRMRRACRKAV-----------------KSQA------------ 1139
            ::.....||       .::...|..||..:.|                 |.:|            
  Fly   732 TQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFC 796

  Fly  1140 -----FYWL------------------IIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLF 1181
                 :.||                  |.:.:.:||..:|.:|:.....::...:..|.||...|
  Fly   797 VWDCCWVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATF 861

  Fly  1182 TCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTK 1246
            ..|..:|:.::..:.||...:|.||..:|..|:.|     .|:....|:||||..|||||||:.|
  Fly   862 AIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLE-----LGLEGVQGLSVLRSFRLLRVFKLAK 921

  Fly  1247 YWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGKEEKY------RMNFD 1305
            .|.:|:.|::.:..::.::.:|..:|.:.|.|||::|||:||.  |:...::::      |.||.
  Fly   922 SWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGK--NYHDHKDRFPDGDLPRWNFT 984

  Fly  1306 CFWQALLTVFQIMTGE----DWNAVMYVGINAYGGVSSYGALACI-YFIILFICGNYILLNVFLA 1365
            .|..:.:.||:::.||    .|:. |||           |.::|| :|:...:.||.::||:|||
  Fly   985 DFMHSFMIVFRVLCGEWIESMWDC-MYV-----------GDVSCIPFFLATVVIGNLVVLNLFLA 1037

  Fly  1366 IAVDNLA-----------DADSLSEV----------------------------EKEEEP----- 1386
            :.:.|..           |.:.::|.                            :..::|     
  Fly  1038 LLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGERT 1102

  Fly  1387 -----------------------------HDE---------SAQKKSHSPTPTIDGMDDHLSIDI 1413
                                         |||         ..::::.......|||:  .:|..
  Fly  1103 NQISWIWSEGKGVCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGME--FTIHG 1165

  Fly  1414 DMEQQE-----------------------------LDDEDKMDHETLSDEEVREMCEE----EEE 1445
            ||:..:                             .|:..|...||:..||.|:..:|    :||
  Fly  1166 DMKNNKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEE 1230

  Fly  1446 VDEEG-----------MITARPRRMSEVNTAT-------KILPIPPGTSFFLFSQ-TNRFRVFCH 1491
            :||||           :|.|....:.:...|.       |..||..|.....|.| ....|:...
  Fly  1231 LDEEGECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTF 1295

  Fly  1492 WLCNHSNFGNIILCCIMFSSAMLAAEN-PLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGF- 1554
            .|..:..|...::..|:.||..||.|: .|.....|..:|...|..||.:|.:|:::|.::.|| 
  Fly  1296 QLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFK 1360

  Fly  1555 VLHDGAFCRSAFNLLDLLVVCVSLISLVSS---SNAISVVKILRVLRVLRPLRAINRAKGLKHVV 1616
            |....|:|     .||.::|.||||:.|:|   :..|...|.:|.||.||||||::|.:|::.||
  Fly  1361 VYFTNAWC-----WLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVV 1420

  Fly  1617 QCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGV 1681
            ..::.|:.:|.|::|| ||:.::                                   :||::||
  Fly  1421 NALVQAIPSIFNVLLV-CLIFWL-----------------------------------IFAIMGV 1449

  Fly  1682 QLFKGKFFKCTD--GSKMT------QDECYGTYLVYDDGDVHKPRLRERE---WSNNRFHFDDVA 1735
            |||.||:|||.|  |:|::      ::.|                  |.|   |.|:..:||.|.
  Fly  1450 QLFAGKYFKCEDMNGTKLSHEIIPNRNAC------------------ESENYTWVNSAMNFDHVG 1496

  Fly  1736 KGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVI- 1799
            ...|.||.|:||:||..::..:|||.:.:..||......:..|::.:||..:||.:|:|:|.:| 
  Fly  1497 NAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIID 1561

  Fly  1800 -------------VTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIPKHGIQYKVWWFVTS 1851
                         ..|..|.:::|.|.......:.    .|||.|..|:.|    |..|:..||.
  Fly  1562 NFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKK----PLKAIPRPRWRP----QAIVFEIVTD 1618

  Fly  1852 SSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAW 1916
            ..|:..|.:.|.:|..|:.:..|:....|..:||.||.||..:|:.|.:.|:.|.|: :||.:.|
  Fly  1619 KKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRY-HYFIEPW 1682

  Fly  1917 NVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKL 1981
            |:||.::|:.|.:.:|.|             ||:|     |......|:.:  .|:.:|.|:::|
  Fly  1683 NLFDVVVVILSILGLVLS-------------DIIE-----KYFVSPTLLRV--VRVAKVGRVLRL 1727

  Fly  1982 LSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQ 2046
            :...:||||||:....|..||..:.||:.|:.||:|:.||..|..:....|  |....||:||.|
  Fly  1728 VKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSG--INDVYNFKTFGQ 1790

  Fly  2047 AVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGEP--CGSSIAYPYFISFYVLCSFLI-IN 2108
            ::::||:.:|...|..::.:...:.  .||...:..|.|  |||:.....|:..|::.|||| ||
  Fly  1791 SMILLFQMSTSAGWDGVLDAIINEE--ACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVIN 1853

  Fly  2109 LFVAVIMDNFDYLTRD-WSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKL 2172
            :::|||::|:...|.| ...|.....|.:..:|.::||:....|::..:...|..:.|||...| 
  Fly  1854 MYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHK- 1917

  Fly  2173 CPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKRTNP 2237
             |::.   :::||::|: ..|.:::...:...:......:....|::...     |.:|..|.:.
  Fly  1918 -PNKY---KIISMDIPI-CRGDLMYCVDILDALTKDFFARKGNPIEETGE-----IGEIAARPDT 1972

  Fly  2238 KLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKE---------QEGKEGHPDSNTVTLQA 2293
            :..:.|........|.     |...|||..:|:.|.|.|         ..|..|.||:.      
  Fly  1973 EGYEPVSSTLWRQREE-----YCARLIQHAWRKHKARGEGGGSFEPDTDHGDGGDPDAG------ 2026

  Fly  2294 GLRTLHEVSPALKRAISGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQSN 2358
                    .||...|..|:......             |||        |||...:|.|..|..|
  Fly  2027 --------DPAPDEATDGDAPAGGD-------------GSV--------NGTAEGAADADESNVN 2062

  Fly  2359 --GALAIGGSASAALGVGGSSLVLGSSDPAGGDYLYDTLNRSVADGVNNITRN 2409
              |..|...:|:||......:...||  |..|.....|.....:||.  :|:|
  Fly  2063 SPGEDAAAAAAAAAAAAAAGTTTAGS--PGAGSAGRQTAVLVESDGF--VTKN 2111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:395416 90/306 (29%)
Ion_trans 1137..1379 CDD:395416 76/298 (26%)
Ion_trans 1496..1809 CDD:395416 99/342 (29%)
Ion_trans 1851..2126 CDD:395416 87/278 (31%)
GPHH 2135..2188 CDD:407139 12/52 (23%)
Ca_chan_IQ 2199..2271 CDD:400901 11/71 (15%)
paraNP_001259619.1 Ion_trans 165..436 CDD:278921 85/289 (29%)
Na_trans_cytopl 515..648 CDD:288761 6/132 (5%)
Ion_trans 835..1028 CDD:278921 61/211 (29%)
Na_trans_assoc 1054..1296 CDD:284034 36/243 (15%)
Ion_trans 1318..1571 CDD:278921 93/311 (30%)
Na_channel_gate 1561..1613 CDD:240441 11/59 (19%)
Ion_trans 1636..1871 CDD:278921 82/259 (32%)
GPHH 1880..1930 CDD:293510 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439101
Domainoid 1 1.000 73 1.000 Domainoid score I3264
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 311 1.000 Inparanoid score I473
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R175
SonicParanoid 00.000 Not matched by this tool.
54.920

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