DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1D and Catsper1

DIOPT Version :10

Sequence 1:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster
Sequence 2:NP_647462.1 Gene:Catsper1 / 225865 MGIID:2179947 Length:686 Species:Mus musculus


Alignment Length:297 Identity:74/297 - (24%)
Similarity:125/297 - (42%) Gaps:73/297 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1840 GIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQ----PLWYTELLDALNMIFTAVFALEFV 1900
            |:|..:.....|..||..|||::.:|||.|..:.:.:    ..||..:||:   ||.:::.||.|
Mouse   339 GLQQMILSLTQSLGFETFIFIVVCLNTVILVAQTFTELEIRGEWYFMVLDS---IFLSIYVLEAV 400

  Fly  1901 FKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLI 1965
            .||.|...: ||.|.||..||.|::.:.:|.|..:|                          |.:
Mouse   401 LKLIALGLE-YFYDPWNNLDFFIMVMAVLDFVLLQI--------------------------NSL 438

  Fly  1966 SINFFR--LFRVMRLVKLLSKGEGIRTL----LWTFIKSFQ-----ALPYVALLIVLLF---FIY 2016
            |.:|:.  |||::::.|.:.....||.|    :.|.:....     :||.:..::.|:|   |::
Mouse   439 SYSFYNHSLFRILKVFKSMRALRAIRVLRRLSILTSLHEVAGTLSGSLPSITAILTLMFTCLFLF 503

  Fly  2017 AVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDT 2081
            :||...:|..         :....||.....:..||...|.:.|..|.:...||           
Mouse   504 SVVLRALFQD---------SDPKRFQNIFTTLFTLFTMLTLDDWSLIYIDNRAQ----------- 548

  Fly  2082 PGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNF 2118
                 |:....|..:.:.|:..|:.:||.:||::|||
Mouse   549 -----GAWYIIPILMIYIVIQYFIFLNLVIAVLVDNF 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:459842
Ion_trans 1137..1379 CDD:459842
Ion_trans 1496..1809 CDD:459842
Ion_trans 1851..2126 CDD:459842 72/286 (25%)
GPHH 2135..2188 CDD:465306
Ca_chan_IQ 2198..2273 CDD:462591
Catsper1NP_647462.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..177
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..271
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 289..318
Ion_trans 353..581 CDD:459842 71/283 (25%)
Blue background indicates that the domain is not in the aligned region.

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