Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006512056.1 | Gene: | Scn5a / 20271 | MGIID: | 98251 | Length: | 2085 | Species: | Mus musculus |
Alignment Length: | 2084 | Identity: | 494/2084 - (23%) |
---|---|---|---|
Similarity: | 848/2084 - (40%) | Gaps: | 628/2084 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 747 ALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFL 811
Fly 812 VIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLR 876
Fly 877 PLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKL-HKACRD--EITG- 937
Fly 938 ----------------------EY-----EENIRPCGVGYQ---CPPGYKCYGGWDGPNDGITNF 972
Fly 973 DNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKE 1037
Fly 1038 RNKA------KNRGDFQKLREKQQIEED---LRGYLDWITQAE-DIEPDA--------------- 1077
Fly 1078 VGGLISDGKGKQP-----------NEMDSTENLG-----------------------------EE 1102
Fly 1103 MPEVQMTESR-------W----------------------------------------------- 1113
Fly 1114 -------RKMKKD---------------------------FDRVNRRMRRACRKAVKSQAF---- 1140
Fly 1141 ------------------------YWL------------------IIVLVFLNTGVLATEHYGQL 1163
Fly 1164 DWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPL 1228
Fly 1229 GVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNF 1293
Fly 1294 DGKEEKYRMN----------FDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYF 1348
Fly 1349 IILFICGNYILLNVFLAIAVDNLADADSLS----------------------------------- 1378
Fly 1379 -------------------------------EVEKEEEPHDESAQKKSHSPTPTIDGMDDHLSID 1412
Fly 1413 IDMEQQELDDEDKMDHETLSDEEVREMCEEEEEVDEEGMITAR-PRRMSEV-------------- 1462
Fly 1463 ---------------------------------NTATKILPIP---------------------- 1472
Fly 1473 ---------PGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNK 1528
Fly 1529 VLNKF-DYFFTAVFTIELILKLISYGFVLH-DGAFCRSAFNLLDLLVVCVSLISLVSSS---NAI 1588
Fly 1589 SVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVK 1653
Fly 1654 CVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDD------- 1711
Fly 1712 ---GDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRP 1773
Fly 1774 IVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNE----GEQEYKNCDLDKNQRNCIEFALKAKPVRR 1834
Fly 1835 YIPKHGIQYKVWWF--VTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFAL 1897
Fly 1898 EFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGS 1962
Fly 1963 NLISINFF---RLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVF 2024
Fly 2025 GKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCD---MNSDTPGEPC 2086
Fly 2087 GSSIAYPYFISFYVLCSFLI-INLFVAVIMDNFDYLTRD-WSILGPHHLDEFIRLWSEYDPDAKG 2149
Fly 2150 RIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTD 2214
Fly 2215 GNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQEG 2279
Fly 2280 KEGHPDSNTVTLQAGLRTLHEVSPA--LKRAISGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHG 2342
Fly 2343 NGTFRRSAKAT------ASQSNGALA--IGGSASAALGVGGSSLVLGSSDPAGGDYLYDTLNRSV 2399
Fly 2400 ADGV 2403 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 95/314 (30%) |
Ion_trans | 1137..1379 | CDD:395416 | 83/363 (23%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 97/331 (29%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 88/282 (31%) | ||
GPHH | 2135..2188 | CDD:407139 | 14/52 (27%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 9/71 (13%) | ||
Scn5a | XP_006512056.1 | Ion_trans | 195..488 | CDD:366146 | 94/308 (31%) |
Na_trans_cytopl | 550..732 | CDD:371806 | 15/181 (8%) | ||
Ion_trans | 781..994 | CDD:366146 | 71/228 (31%) | ||
Na_trans_assoc | 1020..1268 | CDD:368948 | 30/253 (12%) | ||
Ion_trans | 1272..1547 | CDD:366146 | 96/326 (29%) | ||
Na_channel_gate | 1539..1591 | CDD:240441 | 10/52 (19%) | ||
Ion_trans | 1596..1850 | CDD:366146 | 88/279 (32%) | ||
GPHH | 1862..1909 | CDD:374878 | 14/51 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |