Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001192250.1 | Gene: | Scn10a / 20264 | MGIID: | 108029 | Length: | 1958 | Species: | Mus musculus |
Alignment Length: | 2137 | Identity: | 511/2137 - (23%) |
---|---|---|---|
Similarity: | 842/2137 - (39%) | Gaps: | 621/2137 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 696 SMGIANI----PETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRG---KPQPDRPQR------- 746
Fly 747 ----------------------------------------------ALFCLSVKNPLRALCIRIV 765
Fly 766 EWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLH 830
Fly 831 NGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIL 895
Fly 896 KAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKAC---------RDEITGEYEEN--IRP---- 945
Fly 946 ---CGVGY---QCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGS 1004
Fly 1005 DWQWMYFISMVILGAFFVMNLILGVLSGEFSKERN------KAKNRGDFQKLREKQQIEEDLRGY 1063
Fly 1064 LDWIT------------------------------------------------------------ 1068
Fly 1069 ----------QAEDIE-PDAVGGLISDG--KGKQPNEMDS------------------------- 1095
Fly 1096 ------------TENLGEEMPEVQMTESRWRKMKKDFDRVNR--RMRRA---------------- 1130
Fly 1131 -------CRKAVKSQAFYW------------------------LIIVLVFLNTGVLATEHYGQLD 1164
Fly 1165 WLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLG 1229
Fly 1230 VSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNF- 1293
Fly 1294 -DG----KEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFI 1353
Fly 1354 CGNYILLNVFLAIAVDNLADADSLSEVEKEEE--------------------------------- 1385
Fly 1386 -----------PHDESAQKKSHSPT-----------------------------------PTIDG 1404
Fly 1405 MDDHLSIDIDME--------------QQEL----------------------------------- 1420
Fly 1421 -----------DDEDKMDHETLS----DEEVREMCEEEEEVDE------EGMITARPRRMSEVNT 1464
Fly 1465 ATKILPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAE-NPLRANDDLNK 1528
Fly 1529 VLNKFDYFFTAVFTIELILKLISYGFVLH-DGAFCRSAFNLLDLLVVCVSLISLVS---SSNAIS 1589
Fly 1590 VVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKC 1654
Fly 1655 VVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRL 1719
Fly 1720 REREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYII 1784
Fly 1785 IIAFFMVNIFVGFVIVTFQNEGEQEYKNCDL-----DKNQRNCIEFALKAKPVRRYIPKHGIQYK 1844
Fly 1845 --VWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFR 1907
Fly 1908 FKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRL 1972
Fly 1973 FRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITA 2037
Fly 2038 NNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCD---MNSDTPGEPCGSSIAYPYFISFY 2099
Fly 2100 VLCSFLI-INLFVAVIMDNFDYLTRD-WSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRK 2162
Fly 2163 ISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRAT 2227
Fly 2228 IKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKK--RKEQEGKEGHPDSNTVT 2290
Fly 2291 LQAGLRTLHEVSPALKRAISGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATAS 2355
Fly 2356 QSNGALAIGGSASAALGVGGSSLVLGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQ 2412 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 90/301 (30%) |
Ion_trans | 1137..1379 | CDD:395416 | 77/271 (28%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 98/317 (31%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 90/279 (32%) | ||
GPHH | 2135..2188 | CDD:407139 | 13/52 (25%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 11/71 (15%) | ||
Scn10a | NP_001192250.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 27..54 | 9/26 (35%) | |
I. /evidence=ECO:0000305 | 116..404 | 93/305 (30%) | |||
Ion_trans | 147..406 | CDD:278921 | 84/276 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 444..483 | 0/38 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 539..583 | 3/43 (7%) | |||
II. /evidence=ECO:0000305 | 646..910 | 78/275 (28%) | |||
Ion_trans | 681..893 | CDD:278921 | 70/222 (32%) | ||
Na_trans_assoc | 903..1148 | CDD:284034 | 34/257 (13%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1006..1094 | 10/87 (11%) | |||
III. /evidence=ECO:0000305 | 1141..1450 | 103/351 (29%) | |||
Ion_trans | 1170..1428 | CDD:278921 | 91/299 (30%) | ||
Na_channel_gate | 1420..1472 | CDD:240441 | 11/53 (21%) | ||
IV. /evidence=ECO:0000305 | 1459..1758 | 103/319 (32%) | |||
Ion_trans | 1494..1733 | CDD:278921 | 84/259 (32%) | ||
GPHH | 1743..1800 | CDD:293510 | 16/61 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1901..1958 | 14/57 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |