Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011246211.1 | Gene: | Cacna1e / 12290 | MGIID: | 106217 | Length: | 2466 | Species: | Mus musculus |
Alignment Length: | 2602 | Identity: | 872/2602 - (33%) |
---|---|---|---|
Similarity: | 1188/2602 - (45%) | Gaps: | 747/2602 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 587 DEQEQQHDQGDSAEEEDDDE-------------DVDEYFEEEEDDTQAF----------SPFYSS 628
Fly 629 SAELIDNFGGGAGKFFNIM-----------------DFERGASGEGGFSPNGNGGPGSGDVSRTA 676
Fly 677 RYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRG---- 737
Fly 738 -KPQPDRP-----QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDS 796
Fly 797 NVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMK 861
Fly 862 DAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGK 926
Fly 927 LHKACRDEITGEYE--ENIRPCGVGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLE 989
Fly 990 GWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQ 1054
Fly 1055 QIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTENLGEEMPEVQMTESRWRKMKKD 1119
Fly 1120 -------------------------------FDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTG 1153
Fly 1154 VLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETL 1218
Fly 1219 LTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLG 1283
Fly 1284 MQVFGGKFNF-DGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIY 1347
Fly 1348 FIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEE-----------------------PHDE 1389
Fly 1390 SAQKKSH---------------------------------------------------------- 1396
Fly 1397 --SP-----------------------------------------------TPTIDGMDDHLSI- 1411
Fly 1412 -------------DIDMEQQE-------------------------------------------- 1419
Fly 1420 -----LDD----EDKMDHETLSDEEVREMCEEEEE----------------------VDE----- 1448
Fly 1449 -------------------------------------EGMITARP----------RRMSEVNTAT 1466
Fly 1467 KILP----------------------------------------------------IPPGTSFFL 1479
Fly 1480 FSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIE 1544
Fly 1545 LILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNA--------ISVVKILRVLRVLR 1601
Fly 1602 PLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIM 1666
Fly 1667 LVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHF 1731
Fly 1732 DDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVG 1796
Fly 1797 FVIVTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIF 1859
Fly 1860 ILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIV 1924
Fly 1925 LGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIR 1989
Fly 1990 TLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRS 2054
Fly 2055 ATGEAWQEIMMSCSAQPDVKCDMNSDTP-----GEPCGSSIAYPYFISFYVLCSFLIINLFVAVI 2114
Fly 2115 MDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMAC 2179
Fly 2180 KRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIK-TDGNID--DANSELRATIKQIWKRTNPKLLD 2241
Fly 2242 QVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEG----------HPDS-------NTV 2289
Fly 2290 TL-------------QAGLRTLHEVSP-------ALKRAISGNLDELD-----QEPEPMHRRHHT 2329
Fly 2330 LFGSVWSSIRRHG----------NGTFRRSAKATASQSNGALAIGGSASAALGV-----GGSSLV 2379
Fly 2380 LGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAA------AGKLQDELQGAGSGGELRTFG 2438
Fly 2439 ESISMRPLAKNGGGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMIQSTPA 2503
Fly 2504 SPYDQR-RLPTSSDMNGLAESLIGGVLAAEGLGKYCDSEFVGTAAREMREALDMTPEEMNLAAHQ 2567
Fly 2568 ILSNEHSLSLIGSSNGSIFGGSAGGLGGAGSGGVGG-------LGGSSSIRNAFGGS-----GSG 2620
Fly 2621 PSSLSPQH---QPY------------------------------SGTLNSPP-------IPDNRL 2645
Fly 2646 RR 2647 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 153/276 (55%) |
Ion_trans | 1137..1379 | CDD:395416 | 139/242 (57%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 130/320 (41%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 144/279 (52%) | ||
GPHH | 2135..2188 | CDD:407139 | 28/52 (54%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 31/74 (42%) | ||
Cacna1e | XP_011246211.1 | Ion_trans | 235..509 | CDD:366146 | 153/276 (55%) |
Ion_trans | 622..861 | CDD:366146 | 139/242 (57%) | ||
Ion_trans | 1302..1536 | CDD:366146 | 112/273 (41%) | ||
Ion_trans | 1626..1883 | CDD:366146 | 144/279 (52%) | ||
GPHH | 1892..1945 | CDD:374878 | 28/52 (54%) | ||
Ca_chan_IQ | 1956..2029 | CDD:370105 | 31/73 (42%) | ||
SR-25 | 2168..>2243 | CDD:371095 | 18/89 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |