DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-alpha1D and Cacna1e

DIOPT Version :10

Sequence 1:NP_723952.2 Gene:Ca-alpha1D / 34950 FlyBaseID:FBgn0001991 Length:2705 Species:Drosophila melanogaster
Sequence 2:XP_011246211.1 Gene:Cacna1e / 12290 MGIID:106217 Length:2466 Species:Mus musculus


Alignment Length:2602 Identity:872/2602 - (33%)
Similarity:1188/2602 - (45%) Gaps:747/2602 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   587 DEQEQQHDQGDSAEEEDDDE-------------DVDEYFEEEEDDTQAF----------SPFYSS 628
            ||:..:..|....|....||             ..|.:|..:|.:...:          |||...
Mouse    43 DEEAWRPQQCALLEANASDEVGMLPASPRSAVAGFDNFFPVQEGEGPGWEGSTTLDAGSSPFLPV 107

  Fly   629 SAELIDNFGGGAGKFFNIM-----------------DFERGASGEGGFSPNGNGGPGSGDVSRTA 676
            |.|::....||..:..:|:                 ::|....||....    |.|||||     
Mouse   108 SPEVMKRRRGGLIEQRDIIKAHEAHKMQSTPQARRKEWEMARFGEAVVV----GRPGSGD----- 163

  Fly   677 RYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRG---- 737
                  ||.....|               ..||.:..||        .|.|..|.:.||..    
Mouse   164 ------GDSDQSRN---------------RQGTPVPASG--------PAAAYKQSKAQRARTMAL 199

  Fly   738 -KPQPDRP-----QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDS 796
             .|.|.|.     .|:||.....|.:|....::::|.|||::||.||.||||.||:....|..|.
Mouse   200 YNPIPVRQNCFTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDK 264

  Fly   797 NVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMK 861
            ...::.|||.|..|:.||..|..:||:|.||:.|.|:|||||||::||.:|:.|.::||.:. ..
Mouse   265 TPMSRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTH-FN 328

  Fly   862 DAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGK 926
            ...|::.|||.||||||:||||:||||:||.||:||||||..|.||:.|.|:::||||||.:|||
Mouse   329 THVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGK 393

  Fly   927 LHKACRDEITGEYE--ENIRPCGVGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLE 989
            ||:||....:|..|  :...|||| ..||.||:| ..|.|||||||.|||...|:||||||:|:|
Mouse   394 LHRACFMNNSGILEGFDPPHPCGV-QGCPAGYEC-KDWIGPNDGITQFDNILFAVLTVFQCITME 456

  Fly   990 GWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQ 1054
            |||.|||:..||:|:.|.|:|||.::|:|:|||:||:||||||||:|||.:.:||..|.|||.:|
Mouse   457 GWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQ 521

  Fly  1055 QIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTENLGEEMPEVQMTESRWRKMKKD 1119
            |||.:|.||..||.:||::       :::     :.|:...|..| |.:....:..||...|.:|
Mouse   522 QIERELNGYRAWIDKAEEV-------MLA-----EENKNSGTSAL-EVLRRATIKRSRTEAMTRD 573

  Fly  1120 -------------------------------FDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTG 1153
                                           |....|.:|.:.|..||||.|||:::.:|.|||.
Mouse   574 SSDEHCVDISSVGTPLARASIKSTKVDGASYFRHKERLLRISIRHMVKSQVFYWIVLSVVALNTA 638

  Fly  1154 VLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETL 1218
            .:|..|:.|..||.:...|....|:|||..||.||||.:|.:.||.|.||.||..|.:|||.|.:
Mouse   639 CVAIVHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVTVGSIFEVV 703

  Fly  1219 LTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLG 1283
            ..........|:||||.:||||:||:||||.||.|||.||::|::||.|||.|||||||:|||||
Mouse   704 WAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLG 768

  Fly  1284 MQVFGGKFNF-DGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIY 1347
            ||:|||:||| ||...   .|||.|..|::|||||:||||||.|||.||.:.||||| |..:.||
Mouse   769 MQLFGGRFNFNDGTPS---ANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSS-GMWSAIY 829

  Fly  1348 FIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEE-----------------------PHDE 1389
            ||:|.:.|||.||||||||||||||:|..|::.|:|||                       |..|
Mouse   830 FIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNMPSIE 894

  Fly  1390 SAQKKSH---------------------------------------------------------- 1396
            ..:::.|                                                          
Mouse   895 RDRRRRHHMSMWEPRSSHLRERRRRHHMSVWEQRTSQLRRHMQMSSQEALNKEEAPPMNPLNPLN 959

  Fly  1397 --SP-----------------------------------------------TPTIDGMDDHLSI- 1411
              ||                                               |..:|.....||: 
Mouse   960 PLSPLNPLNAHPSLYRRPRPIEGLALGLGLEKCEEERISRGGSLKGDIGGLTSALDNQRSPLSLG 1024

  Fly  1412 -------------DIDMEQQE-------------------------------------------- 1419
                         :.|..|||                                            
Mouse  1025 KREPPWLPRSCHGNCDPIQQEAGGGETVVTFEDRARHRQSQRRSRHRRVRTEGKDSASASRSRSA 1089

  Fly  1420 -----LDD----EDKMDHETLSDEEVREMCEEEEE----------------------VDE----- 1448
                 ||:    |.:.:||..|....:|....|||                      :||     
Mouse  1090 SQERSLDEGVSVEGEKEHEPHSSHRSKEPTIHEEERTQDLRRTNSLMVPRGSGLVGALDEAETPL 1154

  Fly  1449 -------------------------------------EGMITARP----------RRMSEVNTAT 1466
                                                 .|:..:.|          :..:|..:.|
Mouse  1155 VQPQPELEVGKDAALTEQEAEGSSEQALLGDVQLDVGRGISQSEPDLSCMTANMDKATTESTSVT 1219

  Fly  1467 KILP----------------------------------------------------IPPGTSFFL 1479
            ..:|                                                    :.|.:|.|:
Mouse  1220 VAIPDVDPLVDSTVVNISNKTDGEASPLKEAETKEEEEEVEKKKKQKKEKRETGKAMVPHSSMFI 1284

  Fly  1480 FSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIE 1544
            ||.||..|..||::.|...|...||..|..||..||||:|:..|.:.||||..|||.||.|||.|
Mouse  1285 FSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFTFE 1349

  Fly  1545 LILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNA--------ISVVKILRVLRVLR 1601
            :::|:|..|.:|.||::.|..:|:||.:||..:|::. :.:||        |..:|.||||||||
Mouse  1350 MVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAF-ALANALGTNKGRDIKTIKSLRVLRVLR 1413

  Fly  1602 PLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIM 1666
            ||:.|.|...||.|..                                    |||.::|.:.||:
Mouse  1414 PLKTIKRLPKLKAVFD------------------------------------CVVTSLKNVFNIL 1442

  Fly  1667 LVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHF 1731
            :|..|..|:||||.|||||||||.|||.||.|:.||.|.|:   |.:.:|..::.|||..:.||:
Mouse  1443 IVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYV---DHEKNKMEVKGREWKRHEFHY 1504

  Fly  1732 DDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVG 1796
            |::...:||||||||.||||.:|..|:|..:|:.||..:.|..::.:|::|.::..||.|||||.
Mouse  1505 DNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVA 1569

  Fly  1797 FVIVTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIF 1859
            .:|:|||.:|::..:.|.|:||:|.||:||:.|||:.||:|  :|..||:||.||.|.||||||.
Mouse  1570 LIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIM 1634

  Fly  1860 ILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIV 1924
            .:|.:|||.|.||:|:.|..|...|..||:.||.||:||.|.|:.||.|.|||.|.||:||||.|
Mouse  1635 AMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDFITV 1699

  Fly  1925 LGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIR 1989
            :||..:|:.::.|..:||                  |.|:   :|.:|||..||:|||.:|..||
Mouse  1700 IGSITEIILTDSKLVNTS------------------GFNM---SFLKLFRAARLIKLLRQGYTIR 1743

  Fly  1990 TLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRS 2054
            .|||||::||:|||||.|||.:||||||::||||||.|.||..:.|..:|||::|..::::||||
Mouse  1744 ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESHINRHNNFRSFFGSLMLLFRS 1808

  Fly  2055 ATGEAWQEIMMSCSAQPDVKCDMNSDTP-----GEPCGSSIAYPYFISFYVLCSFLIINLFVAVI 2114
            ||||||||||:||..:..  |:.::..|     .|.||:.:||.||:||...||||::|||||||
Mouse  1809 ATGEAWQEIMLSCLGEKG--CEPDTTAPSGQNESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVI 1871

  Fly  2115 MDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMAC 2179
            ||||:|||||.|||||||||||:|:|:|||..|.|||.:.::..:|..:|||||.||.||.::|.
Mouse  1872 MDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAY 1936

  Fly  2180 KRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIK-TDGNID--DANSELRATIKQIWKRTNPKLLD 2241
            ||||.||||:..|.||.|.:||.|::||:|.|| ..|..|  ..:|||:.....||...:.|:||
Mouse  1937 KRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQLDSELQKETLAIWPHLSQKMLD 2001

  Fly  2242 QVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEG----------HPDS-------NTV 2289
            .:||.|...| :||||.||..:|.||:::.|.:|:::..|.          .|.|       |..
Mouse  2002 LLVPMPKASD-LTVGKIYAAMMIMDYYKQSKVKKQRQQLEEQKNAPMFQRMEPSSLPQEIIANAK 2065

  Fly  2290 TL-------------QAGLRTLHEVSP-------ALKRAISGNLDELD-----QEPEPMHRRHHT 2329
            .|             ::|..::..:||       .:..|..|...|..     ||||....:   
Mouse  2066 ALPYLQQDPVSGLSGRSGYPSMSPLSPQEIFQLACMDPADDGQFQEQQSLVNAQEPEVSELK--- 2127

  Fly  2330 LFGSVWSSIRRHG----------NGTFRRSAKATASQSNGALAIGGSASAALGV-----GGSSLV 2379
               ||.||  .||          .|:.|.|:....:.....:....|...:...     ..||.:
Mouse  2128 ---SVQSS--NHGIYLPPDTQEHAGSGRASSMPRLTMDPQVVTDPSSMRRSFSTIRDKRSNSSWL 2187

  Fly  2380 LGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAA------AGKLQDELQGAGSGGELRTFG 2438
            ...|.....:..|.:..||....:          ||:|      :|...|..:   |||..|  |
Mouse  2188 EEFSMERSSENTYKSRRRSYHSSL----------RLSAHRLNSDSGHKSDTHR---SGGRER--G 2237

  Fly  2439 ESISMRPLAKNGGGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMIQSTPA 2503
            .|...:.|             |.|:.:..|.:.|                |.....|...:....
Mouse  2238 RSKERKHL-------------LSPDVSRCNSEER----------------GTQADWESPERRQSR 2273

  Fly  2504 SPYDQR-RLPTSSDMNGLAESLIGGVLAAEGLGKYCDSEFVGTAAREMREALDMTPEEMNLAAHQ 2567
            ||.:.| :.|.......|:||.|..:            ....|..|..|:...:.|:...|.::.
Mouse  2274 SPSEGRSQTPNRQGTGSLSESSIPSI------------SDTSTPRRSRRQLPPVPPKPRPLLSYS 2326

  Fly  2568 ILSNEHSLSLIGSSNGSIFGGSAGGLGGAGSGGVGG-------LGGSSSIRNAFGGS-----GSG 2620
            .|...                 .||:.....|..||       |..:|:.......|     |..
Mouse  2327 SLMRH-----------------TGGISPPPDGSEGGSPLASQALESNSACLTESSNSLHPQQGQH 2374

  Fly  2621 PSSLSPQH---QPY------------------------------SGTLNSPP-------IPDNRL 2645
            |   ||||   :||                              |.|:.|.|       :|:...
Mouse  2375 P---SPQHYISEPYLALHEDSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQMPNGHY 2436

  Fly  2646 RR 2647
            ||
Mouse  2437 RR 2438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-alpha1DNP_723952.2 Ion_trans 767..1042 CDD:459842 153/276 (55%)
Ion_trans 1137..1379 CDD:459842 139/242 (57%)
Ion_trans 1496..1809 CDD:459842 130/320 (41%)
Ion_trans 1851..2126 CDD:459842 144/279 (52%)
GPHH 2135..2188 CDD:465306 28/52 (54%)
Ca_chan_IQ 2198..2273 CDD:462591 31/77 (40%)
Cacna1eXP_011246211.1 Ion_trans 235..509 CDD:459842 153/276 (55%)
Ion_trans 622..861 CDD:459842 139/242 (57%)
Ion_trans 1302..1536 CDD:459842 112/273 (41%)
Ion_trans 1626..1883 CDD:459842 144/279 (52%)
GPHH 1892..1945 CDD:465306 28/52 (54%)
Ca_chan_IQ 1955..2031 CDD:462591 31/76 (41%)

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