Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006497689.1 | Gene: | Cacna1b / 12287 | MGIID: | 88296 | Length: | 2351 | Species: | Mus musculus |
Alignment Length: | 2521 | Identity: | 871/2521 - (34%) |
---|---|---|---|
Similarity: | 1156/2521 - (45%) | Gaps: | 700/2521 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 631 ELIDNFGGGAGKFFNIMDFERGASGEGGFSPNGNGGPGSGDVSRTARYDSGEGDLGGGNNIMGID 695
Fly 696 S-------MGIAN-IPETMNGTTIGPSGAGGQKGGAAAGAAGQKRQQRRGKPQPDRPQRALFCLS 752
Fly 753 VKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAE 817
Fly 818 CVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLRPLRLVS 882
Fly 883 GVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKACRDEITGEYEENIRPCG 947
Fly 948 VGYQCPPGYKCYGG------WDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDW 1006
Fly 1007 QWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQQIEEDLRGYLDWITQAE 1071
Fly 1072 DI------------EP-DAVGGLISDGKGKQPNEMDSTEN----------LGEEMPEVQM----T 1109
Fly 1110 ESRWRKMKKDFDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTN 1174
Fly 1175 VFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLL 1239
Fly 1240 RVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGKEEKYRMNF 1304
Fly 1305 DCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVD 1369
Fly 1370 NLADADSLSEVEKEEE------------------------------------------------- 1385
Fly 1386 -PHDESAQK----------------------------------------------KSHSPTPTI- 1402
Fly 1403 -----------------DGMDDHLSIDIDMEQQELDDEDKMD----------------------- 1427
Fly 1428 --------------------------HETLSDEEV------------------------------ 1436
Fly 1437 ----------------------------------------REMCEEE------------------ 1443
Fly 1444 ------------------------------EEVDEEGMITARPRRMSEVNTATKI---------- 1468
Fly 1469 -------------------------------LPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNI 1502
Fly 1503 ILCCIMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFN 1567
Fly 1568 LLDLLVVCVSLISLVSSS-------NAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKT 1625
Fly 1626 IGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFK 1690
Fly 1691 CTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLY 1755
Fly 1756 VSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCDLDKNQR 1820
Fly 1821 NCIEFALKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTEL 1883
Fly 1884 LDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECD 1948
Fly 1949 IVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLF 2013
Fly 2014 FIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMN 2078
Fly 2079 SDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEY 2143
Fly 2144 DPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPL-NSDGTVLFNATLFAVVRT 2207
Fly 2208 SLSIK-----TDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDY 2267
Fly 2268 FRRFKKRKEQ--EGKEGHPDSNTVTLQAGLR-TLHEVSPALKRAISGNLDELDQEPEPMHRRHHT 2329
Fly 2330 LFGSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGS-------------------ASAALGVGG 2375
Fly 2376 SS-LVLGSSDPAGGDYLYDTLNRSVADGVNNITRNIMQARLAAAGKLQDELQGAGSGGELRTFGE 2439
Fly 2440 SISMRPLAKNGGGAATVAGTLPPEANAINY---------DNRNRGILLHPYNNVYAPNGALPGHE 2495
Fly 2496 RMIQSTPASP---------------------YDQRRLPTSSDMNGLAESLIGGVLAAEGLGKYCD 2539
Fly 2540 SEFVGTAAREMREALDMTPEE----MNLAAHQILSNEHSLSLIGSSNGSIFGGSAGGLGGAGSGG 2600
Fly 2601 VGG------------------LGGSSSIRNAFGGSG---SGPSSLS-------------PQHQPY 2631
Fly 2632 S--GTLNSPPIPDNRLRRVATVTT-------------TNNNNKSQVSQNNS 2667 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 149/280 (53%) |
Ion_trans | 1137..1379 | CDD:395416 | 140/241 (58%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 128/319 (40%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 148/274 (54%) | ||
GPHH | 2135..2188 | CDD:407139 | 32/52 (62%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 32/76 (42%) | ||
Cacna1b | XP_006497689.1 | Ion_trans | 94..367 | CDD:366146 | 149/280 (53%) |
Ion_trans | 482..721 | CDD:366146 | 140/241 (58%) | ||
Granin | <936..>1041 | CDD:279595 | 7/104 (7%) | ||
Ion_trans | 1161..1395 | CDD:366146 | 109/272 (40%) | ||
Ion_trans | 1485..1734 | CDD:366146 | 148/274 (54%) | ||
GPHH | 1743..1796 | CDD:374878 | 32/52 (62%) | ||
Ca_chan_IQ | 1808..1882 | CDD:370105 | 32/76 (42%) | ||
PHA03307 | 1959..>2326 | CDD:223039 | 77/392 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |