Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006530650.1 | Gene: | Cacna1a / 12286 | MGIID: | 109482 | Length: | 2464 | Species: | Mus musculus |
Alignment Length: | 2419 | Identity: | 856/2419 - (35%) |
---|---|---|---|
Similarity: | 1159/2419 - (47%) | Gaps: | 669/2419 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 663 GNGGPGSGDVSRTARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGGAAAGA 727
Fly 728 AGQKRQQ--RRGK------PQPDRP-----QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIF 779
Fly 780 ANCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDF 844
Fly 845 TIVVIGAISTALSQLMKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVL 909
Fly 910 FVIIIYAIIGLELFSGKLHKACRDEITGEYE-ENIRPCGV---GYQCPPGYKCYGGWDGPNDGIT 970
Fly 971 NFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFS 1035
Fly 1036 KERNKAKNRGDFQKLREKQQIEEDLRGYLDWITQAEDI------------EPDAVGGLISDGKGK 1088
Fly 1089 QPNEMDSTENLGEEMPEVQMTES-------RWRKMKKD--FDRVNRRMRRACRKAVKSQAFYWLI 1144
Fly 1145 IVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFV 1209
Fly 1210 VIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFL 1274
Fly 1275 FIVIFALLGMQVFGGKFNFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSS 1339
Fly 1340 YGALACIYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDESA------------- 1391
Fly 1392 ----------------QKKSHSPT-------------------------------PT-------- 1401
Fly 1402 -----------IDGMD------------------------------------------------- 1406
Fly 1407 --------------DHLSIDIDMEQ------------------------------QELDD----- 1422
Fly 1423 --------------------EDKMDHE----TLSDEEVREMCEEE-------------------- 1443
Fly 1444 -----------EEVD-------------------------------------------------- 1447
Fly 1448 -------------------EEGMI-------------TAR-PRRMS-EVNTATKIL--------- 1469
Fly 1470 ----------------------------PIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCC 1506
Fly 1507 IMFSSAMLAAENPLRANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDL 1571
Fly 1572 LVVCVSLISLVSSSNA--------ISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGN 1628
Fly 1629 IVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTD 1693
Fly 1694 GSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSI 1758
Fly 1759 DSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCDLDKNQRNCI 1823
Fly 1824 EFALKAKPVRRYIP--KHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDA 1886
Fly 1887 LNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVE 1951
Fly 1952 GCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIY 2016
Fly 2017 AVVGMQVFGKIALDGGN--------AITANNNFQTFQQAVLVLFRSATGEAWQEIMMSC-SAQPD 2072
Fly 2073 VKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFI 2137
Fly 2138 RLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLF 2202
Fly 2203 AVVRTSLSIK-TDGNID--DANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLI 2264
Fly 2265 QDYFRRFKKRKEQEGKEGHPDSNTVTLQAGLRTLHEVSPALKRAISGN------LDE-------- 2315
Fly 2316 --LDQEPEPMHRRHHTLF--GSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGSASAALGVGGS 2376
Fly 2377 SLVLGSSDP---------AGGDYLYDTLNRSVADGVNNITRNIMQARLAAAGKLQDELQ---GAG 2429
Fly 2430 SGGELRTFGESISMRPLAKNGGGAATVAG------------TLPPEAN-AINYDNRNRG-----I 2476
Fly 2477 LLHPYNNV----------YAPNGALPGHERMIQSTPASPYDQRRL-----------PTSSDMNGL 2520
Fly 2521 AESLIGGVLAAEGLGKYCDSEFVGTA-AREMREALDMTPEEMNLAAHQILSNEHSLSLIGSSNGS 2584
Fly 2585 IFGGSAGGLGGAGS 2598 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 147/278 (53%) |
Ion_trans | 1137..1379 | CDD:395416 | 145/241 (60%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 131/320 (41%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 146/283 (52%) | ||
GPHH | 2135..2188 | CDD:407139 | 33/52 (63%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 30/74 (41%) | ||
Cacna1a | XP_006530650.1 | Ion_trans | 188..462 | CDD:366146 | 147/278 (53%) |
Ion_trans | 579..817 | CDD:366146 | 145/240 (60%) | ||
PHA03247 | <895..1277 | CDD:223021 | 38/381 (10%) | ||
Ion_trans | 1285..1520 | CDD:366146 | 112/273 (41%) | ||
Ion_trans | 1610..1869 | CDD:366146 | 146/283 (52%) | ||
GPHH | 1878..1931 | CDD:374878 | 33/52 (63%) | ||
Ca_chan_IQ | 1942..2015 | CDD:370105 | 29/73 (40%) | ||
PHA03307 | 2046..>2460 | CDD:223039 | 67/363 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.850 |