Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016861136.1 | Gene: | SCN11A / 11280 | HGNCID: | 10583 | Length: | 1916 | Species: | Homo sapiens |
Alignment Length: | 1811 | Identity: | 455/1811 - (25%) |
---|---|---|---|
Similarity: | 783/1811 - (43%) | Gaps: | 401/1811 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 745 QRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYV 809
Fly 810 FLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRV 874
Fly 875 LRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKAC--RD--EI 935
Fly 936 TG--------EYEEN---IRPCGV---GYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCV 986
Fly 987 TLEGW---------TDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNK-- 1040
Fly 1041 -AKNRGDFQKLREKQQIEEDLRGYLDWITQAEDIEPDAVGGL----------------------I 1082
Fly 1083 SDGKGKQPNEMDSTENLGEEMPEVQMTESRWRKMKKD-FDRVNRRMRR----------------- 1129
Fly 1130 --------ACRKAVKSQAFYW------------------------LIIVLVFLNTGVLATEHYGQ 1162
Fly 1163 LDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPP 1227
Fly 1228 LGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFN 1292
Fly 1293 FDGKEEKY------------RMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALAC 1345
Fly 1346 IYFIILFICGNYILLNVFLAIAVDNLADADSLSEVE----------------------------- 1381
Fly 1382 ------KEEEPHDE------SAQKKSHSP----------------------------------TP 1400
Fly 1401 TIDGMDDHLSIDIDMEQQELDDEDKMDHETLSDEEVREMCEEEEEV-------DEEGMITARPRR 1458
Fly 1459 MSEVNT-------------------------ATKILPIPPGTSFFLFSQTNR---------FRVF 1489
Fly 1490 CHWLCNHSNFGNIILCCIMFSSAMLAAEN-PLRANDDLNKVLNKFDYFFTAVFTIELILKLISYG 1553
Fly 1554 FVLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNAISVVKILRVLRVLRPLRAINRAKGLKHVVQC 1618
Fly 1619 VIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQL 1683
Fly 1684 FKGKFFKCTDGSK--------MTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLT 1740
Fly 1741 LFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNE 1805
Fly 1806 ----GEQEYKNCDLDKNQRNCIEFALKAKPVRRYIPK--HGIQYKVWWFVTSSSFEYTIFILIMI 1864
Fly 1865 NTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFI 1929
Fly 1930 DIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWT 1994
Fly 1995 FIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFRSATGEA 2059
Fly 2060 WQEIMM-------SCSAQPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDN 2117
Fly 2118 FDYLTRD-WSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKR 2181
Fly 2182 LVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKRTNP--KLLDQVV 2244
Fly 2245 PPPGNDDEVTVGKFYATYLIQDYFRRF--KKRKEQEGK----EGHPDSNTVTLQAG 2294 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 93/304 (31%) |
Ion_trans | 1137..1379 | CDD:395416 | 74/277 (27%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 91/325 (28%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 85/282 (30%) | ||
GPHH | 2135..2188 | CDD:407139 | 12/52 (23%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 18/73 (25%) | ||
SCN11A | XP_016861136.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |