Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031748783.1 | Gene: | cacna1h / 100494894 | XenbaseID: | XB-GENE-6042121 | Length: | 2460 | Species: | Xenopus tropicalis |
Alignment Length: | 2552 | Identity: | 594/2552 - (23%) |
---|---|---|---|
Similarity: | 947/2552 - (37%) | Gaps: | 892/2552 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 667 PGSGDVSRTARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKG-GAAAGAAGQ 730
Fly 731 KRQQRRGKPQPDRPQRALFCLSVKNPLRALCIRIV--EWKPFEFLILLTIFANCIALAVYTPYPG 793
Fly 794 SDSNVTNQ---TLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTA 855
Fly 856 LSQLMKDAFDV--KALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAII 918
Fly 919 GLELFSGKLHKACRDEITGEYEENIRPCGVGYQ---------------------C---PPGYKC- 958
Fly 959 -------------------YG----GWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQD 1000
Fly 1001 AMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQQIEED------ 1059
Fly 1060 ---------------------------------LRGYLDW------------------------- 1066
Fly 1067 -ITQAE-------------------------------DIE------------PDAVGGLISDGKG 1087
Fly 1088 KQ------------------------------------------PNEMDSTEN------------ 1098
Fly 1099 --------------------------LGE------------------------------------ 1101
Fly 1102 -----EMPEVQMTES---------------------------RWRKMKKDFDRVNR--------- 1125
Fly 1126 -RMRRACRKAVKSQAFYWLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKM 1189
Fly 1190 YSLGFQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNL 1254
Fly 1255 VASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNF---DGKEEKYRMNFDCFWQALLTVFQ 1316
Fly 1317 IMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVDNL-ADAD---SL 1377
Fly 1378 SEVEKEEEPHDESAQK------------------------KSHSPTPTI--------------DG 1404
Fly 1405 MDD---------HLSIDID---MEQQEL------------------------------------- 1420
Fly 1421 ------------------DDED------------------------------------------- 1424
Fly 1425 --------------KMDHETLSDEEVREMCEEEE----EVDEEGMITARPRRMSEVNTATKILPI 1471
Fly 1472 PP-------GTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCIMFSSAMLAAENPLRANDDLNKV 1529
Fly 1530 -LNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSS------SNA 1587
Fly 1588 ISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVV 1652
Fly 1653 KCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSK----MTQDECYGTYLVYDDGD 1713
Fly 1714 VHKPRLRER-EWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAA 1777
Fly 1778 YYIIYIIIIAFFMVNIFVGFVIVTF----QNEGEQEYKNCD------LDKNQRNCIEFALKAK-- 1830
Fly 1831 -------PVRRYIPKHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALN 1888
Fly 1889 MIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGC 1953
Fly 1954 KSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYV---ALLIVLLFFI 2015
Fly 2016 YAVVGMQVFGKIALDGGN---AITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDM 2077
Fly 2078 NSDTPGEPCGSSIAYP-YFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWS 2141
Fly 2142 EYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVR 2206
Fly 2207 TSLSIKTDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRF 2271
Fly 2272 KKRKEQEGKEGHPDSNTVTLQAGLRTLHEVSPALKRAISGNLDELDQEPEPMHRRHHTLFGSVWS 2336
Fly 2337 SIRRHGNGTFRRSAKATASQSNGALAIGG-SASAALGVGGSSLVLGSSDPAGGDYLYDTLNRSVA 2400
Fly 2401 DGVNNITRNIMQARLAAAGKLQDELQGAGSGGELRTFGESISMRPLAKNGGGAATVAGTLPPEAN 2465
Fly 2466 AINY-DNRNRGILLHPYNNVYAP--NGALPGHERMIQSTPASPYDQRRLPTSSDMNGLAESLIGG 2527
Fly 2528 VLAAEGL--GKYC--DSEFVGTAAREMREALDMTPEEMNLAAHQILSNEHSL----SLIGSSNG- 2583
Fly 2584 ---SIFGGSAGGLGGAGSGGVGGLGGSSSIRNAFGGSGSGPSSLSPQHQPYSGTLNSPPIPDNRL 2645
Fly 2646 RRV-ATVTTTNNNNKSQ 2661 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 100/327 (31%) |
Ion_trans | 1137..1379 | CDD:395416 | 91/248 (37%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 98/328 (30%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 96/281 (34%) | ||
GPHH | 2135..2188 | CDD:407139 | 7/52 (13%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 9/71 (13%) | ||
cacna1h | XP_031748783.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |