Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814814.1 | Gene: | cacna1c / 100488055 | XenbaseID: | XB-GENE-991126 | Length: | 2196 | Species: | Xenopus tropicalis |
Alignment Length: | 2225 | Identity: | 1121/2225 - (50%) |
---|---|---|---|
Similarity: | 1359/2225 - (61%) | Gaps: | 370/2225 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 686 GGGNNIMGIDSMGIANIPETMNGTT------IGPSGAG------------GQKGGAAAGA----- 727
Fly 728 --AGQKRQQ-----RRGKPQPDRPQRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIAL 785
Fly 786 AVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIG 850
Fly 851 AISTALSQLMK-----------DAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHI 904
Fly 905 ALLVLFVIIIYAIIGLELFSGKLHKACRDEITGEY-----EENIRPCGV----GYQCPPGYKCYG 960
Fly 961 GWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNL 1025
Fly 1026 ILGVLSGEFSKERNKAKNRGDFQKLREKQQIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGK-- 1088
Fly 1089 ----QPNEMDSTENLG-----EEMPEVQMTESRWRKMKKDFDRV----NRRMRRACRKAVKSQAF 1140
Fly 1141 YWLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRF 1205
Fly 1206 DCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLL 1270
Fly 1271 LLFLFIVIFALLGMQVFGGKFNFDGKEEKYRMNFDCFWQALLTVFQIMTGEDWNAVMYVGINAYG 1335
Fly 1336 GVSSYGALACIYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDE--------SAQ 1392
Fly 1393 KKSH------SPTPTIDGMDDHLSIDIDMEQQELDDEDKMDHETLSDEEVREMCE---------E 1442
Fly 1443 EEEVDEEGMITARPRRMSEVNTATKILPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFGNIILCCI 1507
Fly 1508 MFSSAMLAAENPLRANDDLN--------------------KVLNKFDYFFTAVFTIELILKLISY 1552
Fly 1553 GFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNAISVVKILRVLRVLRPLRAINRAKGLKHVVQ 1617
Fly 1618 CVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQ 1682
Fly 1683 LFKGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTF 1747
Fly 1748 EGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKN 1812
Fly 1813 CDLDKNQRNCIEFALKAKPVRRYIPKHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQP 1877
Fly 1878 LWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSK--D 1940
Fly 1941 TSQIAECDIVEG-----------------CKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGI 1988
Fly 1989 RTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTFQQAVLVLFR 2053
Fly 2054 SATGEAWQEIMMSCSAQPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNF 2118
Fly 2119 DYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLV 2183
Fly 2184 SMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPG 2248
Fly 2249 NDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEGHPDS-NTVTLQAGLRTLHEVSPALKRAISGN 2312
Fly 2313 L---DELDQ---------EPEPMHRRHHTLFGS----VWSSIR---------------------- 2339
Fly 2340 ------------------------------RHGNGT-------FRRSAKATASQ-----SNGALA 2362
Fly 2363 IGGSASAALGVGGSSLVLGSSDPAGGDYLYDTL-----------------------NRSVADGVN 2404
Fly 2405 NITRNIMQA------RLAAAGKL--------------------------------QDELQGAGSG 2431
Fly 2432 GELR------TFGESISMRPL--AKNGGGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPN 2488
Fly 2489 GALPGHERMIQSTPASPYDQRRLPTSSDMNGLAESLIGGVLAAEGLGKYC-DSEFVGTAAREMRE 2552
Fly 2553 ALDMTPEEMNLAAHQILSNEHSLSLIGSSNGSIFGGS---AGGLGGAGSGGVGGLGGSSSIRNAF 2614
Fly 2615 GGSGSGPSSLSPQHQ 2629 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 194/294 (66%) |
Ion_trans | 1137..1379 | CDD:395416 | 177/241 (73%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 180/332 (54%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 175/293 (60%) | ||
GPHH | 2135..2188 | CDD:407139 | 44/52 (85%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 57/71 (80%) | ||
cacna1c | XP_012814814.1 | Ion_trans | 169..445 | CDD:278921 | 179/276 (65%) |
Ion_trans | 570..793 | CDD:278921 | 165/223 (74%) | ||
Ion_trans | 985..1230 | CDD:278921 | 165/280 (59%) | ||
Ion_trans | 1290..1564 | CDD:278921 | 166/275 (60%) | ||
GPHH | 1572..1635 | CDD:293510 | 54/62 (87%) | ||
Ca_chan_IQ | 1637..1708 | CDD:285917 | 57/71 (80%) | ||
CAC1F_C | 1731..2149 | CDD:293490 | 83/436 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 377 | 1.000 | Domainoid score | I851 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1988 | 1.000 | Inparanoid score | I55 |
OMA | 1 | 1.010 | - | - | QHG48156 | |
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 1 | 1.000 | - | - | otm48359 | |
Panther | 1 | 1.100 | - | - | O | PTHR45628 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X533 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.080 |