Sequence 1: | NP_723952.2 | Gene: | Ca-alpha1D / 34950 | FlyBaseID: | FBgn0001991 | Length: | 2705 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031749252.1 | Gene: | scn2a / 100486750 | XenbaseID: | XB-GENE-6447552 | Length: | 1970 | Species: | Xenopus tropicalis |
Alignment Length: | 1954 | Identity: | 469/1954 - (24%) |
---|---|---|---|
Similarity: | 808/1954 - (41%) | Gaps: | 586/1954 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 747 ALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFL 811
Fly 812 VIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLR 876
Fly 877 PLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKAC---------- 931
Fly 932 -------RDEITGEYEENIRP--CG----VGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVF 983
Fly 984 QCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKA------K 1042
Fly 1043 NRGDFQKLREKQQIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTENLG-EEMPEV 1106
Fly 1107 QMTESR-----------WRKMKK------------------------------DFDRVNRRM--- 1127
Fly 1128 ----------------------------------------------------------------- 1127
Fly 1128 -RRACRKAVKSQ----------------------------------------------------- 1138
Fly 1139 -------------------------------------------AFY--------------WL--- 1143
Fly 1144 ---------------IIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLG 1193
Fly 1194 FQGYFVSLFNRFDCFVVIGSITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASL 1258
Fly 1259 LNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGKE---------EKYRMNFDCFWQALLTV 1314
Fly 1315 FQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAV-----DNLADA 1374
Fly 1375 DSLSEVEKEE--------------------------EPHDESAQKKSHSPTPTIDGMDD-----H 1408
Fly 1409 LSIDIDMEQQELDDEDKMDHETLSDEEVREMCEEEEEVDEEGMITARPRRMSEVN--TATKILPI 1471
Fly 1472 PPGTSFFLFSQTNRF-------------------------------------------------- 1486
Fly 1487 ----------------------------RVFCHWLCNHSNFGNIILCCIMFSSAMLAAEN-PLRA 1522
Fly 1523 NDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLH-DGAFCRSAFNLLDLLVVCVSLISLVSSS- 1585
Fly 1586 --NAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLF 1648
Fly 1649 KYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKC---TDGSKMTQDECYGTYLVYD 1710
Fly 1711 DGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIV 1775
Fly 1776 AAYYIIYIIIIAFFMVNIFVGFVIVTFQNE----GEQEYKNCDLDKNQRNCIEFALK-------A 1829
Fly 1830 KPVRRYIPKHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAV 1894
Fly 1895 FALEFVFKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKS 1959
Fly 1960 AGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVF 2024
Fly 2025 GKIALDGGNAITANNNFQTFQQAVLVLFRSATGEAWQEIM--MSCSAQPDVKCDMNSDTPGE--- 2084
Fly 2085 -PCGS-SIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWS-ILGPHHLDEFIRLWSEYDPD 2146
Fly 2147 AKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSI 2211
Fly 2212 KTDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGK---FYATYLIQDYFRRFKK 2273
Fly 2274 RKEQ 2277 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ca-alpha1D | NP_723952.2 | Ion_trans | 767..1042 | CDD:395416 | 91/303 (30%) |
Ion_trans | 1137..1379 | CDD:395416 | 87/383 (23%) | ||
Ion_trans | 1496..1809 | CDD:395416 | 94/324 (29%) | ||
Ion_trans | 1851..2126 | CDD:395416 | 84/281 (30%) | ||
GPHH | 2135..2188 | CDD:407139 | 13/52 (25%) | ||
Ca_chan_IQ | 2199..2271 | CDD:400901 | 15/74 (20%) | ||
scn2a | XP_031749252.1 | Ion_trans | 127..408 | CDD:395416 | 90/297 (30%) |
Na_trans_cytopl | 488..678 | CDD:403218 | 9/189 (5%) | ||
Ion_trans | 727..940 | CDD:395416 | 71/227 (31%) | ||
Na_trans_assoc | 966..1175 | CDD:399489 | 31/225 (14%) | ||
Ion_trans | 1179..1454 | CDD:395416 | 93/319 (29%) | ||
Na_channel_gate | 1446..1498 | CDD:240441 | 12/57 (21%) | ||
Ion_trans | 1503..1758 | CDD:395416 | 84/279 (30%) | ||
GPHH | 1770..1817 | CDD:407139 | 13/51 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |