DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4892 and CDV3

DIOPT Version :9

Sequence 1:NP_609778.3 Gene:CG4892 / 34949 FlyBaseID:FBgn0028884 Length:238 Species:Drosophila melanogaster
Sequence 2:XP_005247645.1 Gene:CDV3 / 55573 HGNCID:26928 Length:259 Species:Homo sapiens


Alignment Length:252 Identity:61/252 - (24%)
Similarity:90/252 - (35%) Gaps:69/252 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLDDFFAKKDNKKTKKKKPNYLATDELYKTLEESAKLATDADSVKSMENENRT------------ 55
            |||:||||:|.||.|                |.|.:.|:.|.:..|....:..            
Human     8 SLDNFFAKRDKKKKK----------------ERSNRAASAAGAAGSAGGSSGAAGAAGGGAGAGT 56

  Fly    56 ---EGPTESTGSAMKSLEFSLLYPNESVKEEDEWSEFTEENRMELMSLGHSSGSTILTQLAVGDV 117
               :|.|.|.|:|........:     .|:||||.|. |:..::.      ||..:.......:.
Human    57 RPGDGGTASAGAAGPGAATKAV-----TKDEDEWKEL-EQKEVDY------SGLRVQAMQISSEK 109

  Fly   118 KAQDSEQTDTGGDGMNVGQKHDDDIGNTTCPWVKMEHALEQQKLKEPMSV-EQPNKKEPSEVKSQ 181
            :..|:|:....||....|......:..::.||.|   ....|....|:.| |.|   ||: :.|.
Human   110 EEDDNEKRQDPGDNWEEGGGGGGGMEKSSGPWNK---TAPVQAPPAPVIVTETP---EPA-MTSG 167

  Fly   182 IYIPPALRQSQGDFNRRDQAESRLRKVPSKMSGKPQAPDLNSDEYFPSLSKALKRTK 238
            :|.||..|.            :..||.|.      ..|::.||..||||....|..:
Human   168 VYRPPGARL------------TTTRKTPQ------GPPEIYSDTQFPSLQSTAKHVE 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4892NP_609778.3 CDV3 82..233 CDD:405941 38/151 (25%)
CDV3XP_005247645.1 CDV3 81..201 CDD:292003 38/151 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49391
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005872
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16284
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.110

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