DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4892 and cdv3

DIOPT Version :9

Sequence 1:NP_609778.3 Gene:CG4892 / 34949 FlyBaseID:FBgn0028884 Length:238 Species:Drosophila melanogaster
Sequence 2:XP_012819977.1 Gene:cdv3 / 448377 XenbaseID:XB-GENE-5805319 Length:245 Species:Xenopus tropicalis


Alignment Length:248 Identity:64/248 - (25%)
Similarity:91/248 - (36%) Gaps:72/248 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLDDFFAKKDNKKTKKKKPNYLATDELYKTLEESAKLATDADSVKSM---------ENENRTEGP 58
            ||||||||:|.||.|.|.....|......|.......::.:.|..||         |...::|.|
 Frog     8 SLDDFFAKRDKKKKKDKGGPVSAAGSRGATRPPDGAPSSFSSSASSMSGAGKGIKKEKSGKSENP 72

  Fly    59 TESTGSAMKSLEFSLLYPNESVKEEDEWSEFTEENRMELMSLGHSSGSTILTQLAVGDVKAQDSE 123
            .:.                 ..||:|||.|| |:..::...|.       :..|.:...:..|.|
 Frog    73 DQL-----------------QEKEDDEWKEF-EQKEVDYSGLR-------IQSLQISSNEKDDDE 112

  Fly   124 ---QTDTGGDGMNVGQKHDDDIGNTTCPWVKMEHALEQQKLKEPMS--VEQPNKKEPSEVKSQIY 183
               :.:.|.|..::|....|   .::.||.|...|      :.|:|  :|.|   ||... ..:|
 Frog   113 YEKKEEQGADWEDIGGCGTD---KSSGPWNKTAQA------QAPISAVIEAP---EPVHT-GGVY 164

  Fly   184 IPPALRQSQGDFNRRDQAESRLRKVPSKMSGKPQA-PDLNSDEYFPSLSKALK 235
            .|||.|.|..                   :.|||. |::.||..||||....|
 Frog   165 RPPAARASVA-------------------TRKPQGPPEIFSDTQFPSLQATAK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4892NP_609778.3 CDV3 82..233 CDD:405941 41/156 (26%)
cdv3XP_012819977.1 CDV3 79..196 CDD:373782 41/156 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49391
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005872
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16284
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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