DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-Ia and beat-Vc

DIOPT Version :9

Sequence 1:NP_001285975.1 Gene:beat-Ia / 34947 FlyBaseID:FBgn0013433 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_001356887.1 Gene:beat-Vc / 41575 FlyBaseID:FBgn0038084 Length:297 Species:Drosophila melanogaster


Alignment Length:359 Identity:98/359 - (27%)
Similarity:145/359 - (40%) Gaps:91/359 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALTTILLALTLEMTAALRDV--------RVRVPHAVRRSEKAILKCFYDIEDDSLYSVKWYKGRR 67
            :|..:|.||.|.....:..|        .:.||..:..::||.|.|.|.:.:.:|.||||||...
  Fly     2 SLLRLLGALLLATFNGMAPVPAEGLHLSNLSVPRIIDVAQKAKLFCSYAMGNRTLNSVKWYKDGL 66

  Fly    68 EFYRYTPKETPPMKVFHFPGVKVRRVSSNESQ----VVLDAVTMATSGKYSCEVSADAPSFHTLI 128
            ||:||:|...|....|...||.:...|.:.:|    |.|:.:|..:||:|.||||.|||.|..:.
  Fly    67 EFFRYSPLTPPTTNWFPVKGVTIADGSPHCNQFICNVELEKLTAHSSGQYRCEVSGDAPEFKLID 131

  Fly   129 AAAELEVIETPHNAPFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNNEEVNPALVRHHKIL 193
            ..|.:.|...|...|||:|:|..|:..|.|..||::..|.|.|.|||.:||:.. |.    |. |
  Fly   132 QTANMTVGVLPKFDPFISGVRHAYKYHDYLEANCSTEMSSPMAKLTWYINNKTA-PG----HS-L 190

  Fly   194 RDARNDMETAVVGIHFVVT---------DQHF--DNGKLKLRCSAQLHDVYWKTTEKIILETDLF 247
            :...|::...|.|.|...:         ||.|  .:..|:|||:|.:..:.....|..:..|.| 
  Fly   191 QPQINEVSRNVDGFHLFASHLHLRLHLDDQRFISKSEMLELRCTADIMGLAAVRRESRVRTTIL- 254

  Fly   248 PKHGNGANGNHVNPDDFYDQYALHEDHLHNKKNSYLTQLQEFFFYHFVPSGEEDDGTEGGLGDGG 312
                                 ||                             .|.||:..|.:.|
  Fly   255 ---------------------AL-----------------------------RDAGTKQRLTENG 269

  Fly   313 AAWRGAGSSSSRLSPSSSQSCWMVGGSLMAVLSW 346
            :...|         ..:|.:.|::  ||:.:|.|
  Fly   270 SCMTG---------QPASLAAWLL--SLVHILRW 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IaNP_001285975.1 Ig 32..118 CDD:299845 33/89 (37%)
Ig 161..240 CDD:299845 26/89 (29%)
beat-VcNP_001356887.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451080
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I5491
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.990

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