DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beat-Ia and CG13532

DIOPT Version :9

Sequence 1:NP_001285975.1 Gene:beat-Ia / 34947 FlyBaseID:FBgn0013433 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_611728.1 Gene:CG13532 / 37632 FlyBaseID:FBgn0034788 Length:263 Species:Drosophila melanogaster


Alignment Length:148 Identity:31/148 - (20%)
Similarity:53/148 - (35%) Gaps:44/148 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TILLALT-LEMTAALRDVRVRVPHAV-----RRSEKAILKCFYDI-EDDSLYSVKWYKGRREFYR 71
            |:|..|. |.:|.::|...:|||...     ...:..:|.|..:| ..:..:.:||.......|:
  Fly    12 TLLAVLALLSVTHSVRITNLRVPRTYTLFRDHEPDPLVLDCEVEIGPREQGFVLKWLFNNHSIYQ 76

  Fly    72 YTP----------KETPPMKVFHFPG----VKVRRVSSNESQVVLDAVTMATSGKYSCEV----S 118
            :.|          |.....|:|...|    :.::....|            .:|:|:|.|    |
  Fly    77 WIPSVKGFAMGFMKSKIDTKIFTMEGSPGVISIKNPDWN------------MTGEYTCAVQTFES 129

  Fly   119 ADAPSFHTLIAAAELEVI 136
            .|..|       |.|::|
  Fly   130 TDKRS-------ARLQII 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IaNP_001285975.1 Ig 32..118 CDD:299845 19/109 (17%)
Ig 161..240 CDD:299845
CG13532NP_611728.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451086
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.