DRSC/TRiP Functional Genomics Resources

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Protein Alignment BicC and SCP160

DIOPT Version :9

Sequence 1:NP_476865.1 Gene:BicC / 34946 FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_012455.1 Gene:SCP160 / 853365 SGDID:S000003616 Length:1222 Species:Saccharomyces cerevisiae


Alignment Length:844 Identity:166/844 - (19%)
Similarity:309/844 - (36%) Gaps:246/844 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NKLMYPSAADVAKPPMVGLEVEAGSIG-SLSSLHALPS--TTSVGSGAPSETQSEISSV------ 63
            |.:||.:...|.|    |||....::. ||.|:.:||:  |.::...|.|:..::|.:|      
Yeast   409 NLIMYFTKYSVLK----GLEESHPNVKISLPSIQSLPTAETVTIHISAKSDEANDIKAVRKELIS 469

  Fly    64 --------------DSDW-------------SDIRAIAMKLGVQNPDD--------LHTERFKVD 93
                          |.|:             |:.....::.|...|:|        ...|.||..
Yeast   470 FVNNIPPSETLVITDLDYELFGGSIKHCLLASESSVAFVQFGDYYPNDNSILLVALTEDEDFKPS 534

  Fly    94 RQKLE-QLIKAESSIEGM----NGAE---YFFHDIMNTT---DTYVSWPCRLKIGAKSKKDPHVR 147
            .:::: .|.||..|:..:    |..|   |.|.:.:..:   .:..:|  :|.:...|:::.|::
Yeast   535 IEEIQASLNKANESLNSLRTKQNNMETKTYEFSEEVQDSLFKPSSATW--KLIMEDISEQEGHLQ 597

  Fly   148 I-----------VGKVDQVQRAKERILSS-LDSRGTRVIMKMDVSYTDHSYIIGRGGNNIKRIMD 200
            |           |...::..:|..:|..| |:|..::..|.:::.....:.:||..|:|:::|.:
Yeast   598 IKLHTPEENQLTVRGDEKAAKAANKIFESILNSPSSKSKMTVNIPANSVARLIGNKGSNLQQIRE 662

  Fly   201 DTHTHIHFPDSNRSNPT-EKSNQVSLCGSLEGVERARALV-------------RLSTPLLISFEM 251
            .....|..|:...:|.: :|:.:|:|.|....:..|:..:             .|..|  :.|..
Yeast   663 KFACQIDIPNEENNNASKDKTVEVTLTGLEYNLTHAKKYLAAEAKKWADIITKELIVP--VKFHG 725

  Fly   252 PVMGPNKPQPDHETPYIKMIETKFNVQVIFSTRPKLHTSLVLVKGSEKESAQVRDATQLLINFAC 316
            .::||      |.| |...::.|:||.:.|   |: ...:|.::|..:...:..:..:.|::|..
Yeast   726 SLIGP------HGT-YRNRLQEKYNVFINF---PR-DNEIVTIRGPSRGVNKAHEELKALLDFEM 779

  Fly   317 ESIASQILVNVQMEISPQHHEIVKGKNNVNLLSIMERTQTKIIFPDLS-DMNVKPLKKSQVTISG 380
            |: ..::::||..|..|:    :.|||..|:..|......::.|...| |...:...:.::.|:|
Yeast   780 EN-GHKMVINVPAEHVPR----IIGKNGDNINDIRAEYGVEMDFLQKSTDPKAQETGEVELEITG 839

  Fly   381 RIDDVYLARQQLLGNLPVALIFDFPDNHNDASEIMSLNTKY-------GVYI-----------TL 427
            ...::..|.:::  ...||...||      .:|::.::.||       |.:|           .:
Yeast   840 SRQNIKDAAKRV--ESIVAEASDF------VTEVLKIDHKYHKSIVGSGGHILREIISKAGGEEI 896

  Fly   428 RQKQRQSTLA------IVVKGVEKFIDKIYEARQEILRLATPFVKPEIPDYYFMPKDKDLNLAYR 486
            |.|......|      |.|:|.:||:.|:.|...:|:                  ||.: |...:
Yeast   897 RNKSVDIPNADSENKDITVQGPQKFVKKVVEEINKIV------------------KDAE-NSVTK 942

  Fly   487 TQLTALLAGYVDSP--KTPSLLPPS--LAGQLTPYANNNHLLLN---ANGLATPTG--------- 535
            |         :|.|  :..:|:.|.  :..||....|.|..:.|   .:|..|.||         
Yeast   943 T---------IDIPAERKGALIGPGGIVRRQLESEFNINLFVPNKDDPSGKITITGAPENVEKAE 998

  Fly   536 -----------------VCAPTQKYMQLHNSFQQAQNRSMVA----GGQSNNGNYLQVPGAVAP- 578
                             |.|...:|:....:|.|.....:..    |..|...|.|    |.|| 
Yeast   999 KKILNEIIRENFDREVDVPASIYEYVSERGAFIQKLRMDLSVNVRFGNTSKKANKL----ARAPI 1059

  Fly   579 --PLKPPTVSPRNSCSQNTSGYQSFSSSTTSLEQ-------SYPPYAQLPGTVS---------ST 625
              ||:....|.....::.|........:.||.|:       :|.| ..|...:|         .|
Yeast  1060 EIPLEKVCGSTEGENAEKTKFTIEEVGAPTSSEEGDITMRLTYEP-IDLSSILSDGEEKEVTKDT 1123

  Fly   626 SSSTAGSQ-----------NRAHYSPDSTYGSEGGG--------VGGGGGGGARLGRRLSDGVL 670
            |:.:|..:           .|...:|.:||.....|        :.|.||...:..|..:|.::
Yeast  1124 SNDSAKKEEALDTAVKLIKERIAKAPSATYAGYVWGADTRRFNMIVGPGGSNIKKIREAADVII 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BicCNP_476865.1 vigilin_like_KH 174..240 CDD:239087 14/79 (18%)
vigilin_like_KH 327..393 CDD:239087 14/66 (21%)
SAM_BICC1 805..868 CDD:188919
SAM 807..867 CDD:197735
SCP160NP_012455.1 235kDa-fam <170..>402 CDD:130673
KH-I_ScSCP160_rpt1 172..257 CDD:411874
Glyco_tranf_GTA_type <502..>606 CDD:416254 19/105 (18%)
KH-I_ScSCP160_rpt2 632..707 CDD:411875 14/74 (19%)
KH-I_ScSCP160_rpt3 711..777 CDD:411876 16/78 (21%)
KH-I_ScSCP160_rpt4 780..857 CDD:411877 17/83 (20%)
KH-I_ScSCP160_rpt5 859..935 CDD:411878 18/99 (18%)
KH-I_ScSCP160_rpt6 940..1008 CDD:411879 14/76 (18%)
KH-I_ScSCP160_rpt7 1152..1218 CDD:411880 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.860

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