DRSC/TRiP Functional Genomics Resources

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Protein Alignment BicC and HDLBP

DIOPT Version :10

Sequence 1:NP_476865.1 Gene:BicC / 34946 FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_005327.1 Gene:HDLBP / 3069 HGNCID:4857 Length:1268 Species:Homo sapiens


Alignment Length:585 Identity:126/585 - (21%)
Similarity:216/585 - (36%) Gaps:166/585 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SFNKLMYPSAADVAKPP------MVGLEVEAGSIG-SLSSLHALPSTTSVGS-GAPSETQSEISS 62
            |..:::..:...|..||      .|.|..|...:| :|:.::|..::.:|.| .|||        
Human   317 SLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVAAPS-------- 373

  Fly    63 VDSDWSDIRAIAMKLG------VQNPDDLHTERFKVDRQKL------EQLIKAESSIEGM----- 110
                |.. |.|..|.|      .|....:|.| |.....|:      |.:..|:..||||     
Human   374 ----WLH-RFIIGKKGQNLAKITQQMPKVHIE-FTEGEDKITLEGPTEDVNVAQEQIEGMVKDLI 432

  Fly   111 NGAEYF-------FH---------DIMNTTDTY-VSWPCRLKIGAKSKKDPHVRIVGKVDQVQRA 158
            |..:|.       ||         :|....|.| ||    ::|...|:|...:||.|....||:|
Human   433 NRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVS----VRIPPDSEKSNLIRIEGDPQGVQQA 493

  Fly   159 KERIL---SSLDSRGTRVIMKMDVSYTDHSYIIGRGGNNIKRIMDD-THTHIHFPDSNRSNPTEK 219
            |..:|   |.:::..|:.::   :....|..|||:.|..|:.|.|. ....|:|||     |.:|
Human   494 KRELLELASRMENERTKDLI---IEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-----PAQK 550

  Fly   220 SNQVSLCGSLEGVERARALVR------------LSTPLLISFEMPVMGP---------------- 256
            |:.|.|.|....||:....::            :|.|:...|...::|.                
Human   551 SDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKI 615

  Fly   257 NKPQPDHETPYIKMIETKFN------------------VQVIFSTRPKLHTSLVLVKGS------ 297
            :.|..:..:..|.:...:.|                  .:|..|...|||.||:..||.      
Human   616 DLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIM 680

  Fly   298 ----------------------EKESAQVRDATQLLINFACESIASQILVNVQMEISPQHHEIVK 340
                                  ...|:.|..|.:.|::.|.|.......|:::.:  |::|:.:.
Human   681 EECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAK--PEYHKFLI 743

  Fly   341 GKNNVNLLSIMERTQTKIIFPDLSDMNVKPLKKSQVTISGRIDDVYLARQQL------LGNLPVA 399
            ||....:..:.:.|..::|||...|.:     :..:||.|:.|.|..|:::|      |.|:...
Human   744 GKGGGKIRKVRDSTGARVIFPAAEDKD-----QDLITIIGKEDAVREAQKELEALIQNLDNVVED 803

  Fly   400 LIFDFPDNHND-----ASEIMSLNTKY-GVYITLRQKQRQSTLAIVVKGVEKFIDKIYEARQEIL 458
            .:...|.:|..     ...:..:..:| ||.::..:...||. .:.:||.:..::...:..|||:
Human   804 SMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD-KVTLKGAKDCVEAAKKRIQEII 867

  Fly   459  458
            Human   868  867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BicCNP_476865.1 KH-I_BICC1_rpt1 85..166 CDD:411848 31/111 (28%)
KH-I_BICC1_rpt2 171..240 CDD:411849 21/69 (30%)
KH-I_BICC1_rpt3 325..393 CDD:411850 17/73 (23%)
SAM_BICC1 805..868 CDD:188919
HDLBPNP_005327.1 KH-I_Vigilin_rpt1 77..144 CDD:411833
KH-I_Vigilin_rpt2 147..221 CDD:411834
KH-I_Vigilin_rpt3 224..283 CDD:411835
KH-I_Vigilin_rpt4 297..358 CDD:411836 9/40 (23%)
KH-I_Vigilin_rpt5 364..433 CDD:411837 21/82 (26%)
KH-I_Vigilin_rpt6 435..502 CDD:411804 19/70 (27%)
KH-I_Vigilin_rpt7 507..573 CDD:411838 21/73 (29%)
KH-I_Vigilin_rpt8 583..644 CDD:411839 7/60 (12%)
KH-I_Vigilin_rpt9 653..722 CDD:411840 14/68 (21%)
KH-I_Vigilin_rpt10 726..791 CDD:411841 16/71 (23%)
KH-I_Vigilin_rpt11 802..867 CDD:411842 11/65 (17%)
KH-I_Vigilin_rpt12 875..970 CDD:411843
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..944
KH-I_Vigilin_rpt13 972..1049 CDD:411844
KH-I_Vigilin_rpt14 1053..1126 CDD:411845
KH-I_Vigilin_rpt15 1128..1196 CDD:411846
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1233..1268
Blue background indicates that the domain is not in the aligned region.

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