DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BicC and bcc-1

DIOPT Version :9

Sequence 1:NP_476865.1 Gene:BicC / 34946 FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_502067.2 Gene:bcc-1 / 178008 WormBaseID:WBGene00000246 Length:644 Species:Caenorhabditis elegans


Alignment Length:843 Identity:199/843 - (23%)
Similarity:318/843 - (37%) Gaps:279/843 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VQNPDDLHTERFKVDRQKLEQLI--KAESSIEGMNGAEYFFHDIMNTTDTYVSWPCRLKIGAKSK 141
            :|.||....::.:|||:|||.:|  :.:::...:..||.||.::|:.::..|.||.:||||||:|
 Worm     8 IQLPDGRFEQKIQVDRRKLESMITGRIDNTSHQLPTAESFFANVMSYSNAEVIWPSQLKIGAKTK 72

  Fly   142 KDPHVRIVGKVDQVQRAKERILSSLDSRGTRVIMKMDVSYTDHSYIIGRGGNNIKRIMDDTHTHI 206
            |||:|:::|.::|::.|:..:|:||..:..||.:||::.::.||:|||:||..|:::|..|..||
 Worm    73 KDPYVKVIGSIEQIESARTLVLNSLQIKKERVSLKMELHHSLHSHIIGKGGRGIQKVMKMTSCHI 137

  Fly   207 HFPDSNRSNPTEKSNQVSLCGSLEGVERARALVRLSTPLLISFEMPVMGPNKP-------QPDHE 264
            ||||||:.:.:.||:|||:.|:...|..|...:|...||.:..::|...|.:|       |.|.:
 Worm   138 HFPDSNKYSDSNKSDQVSISGTPVNVFEALKHLRSMCPLTVYMKLPWYNPGQPDLRPLMSQMDLD 202

  Fly   265 TPY--------IKMIETKFNVQVIFSTRPKLHTSLVLVKGSEKESAQVRDATQLLINFACESIAS 321
            ...        |||..:: :..|:|:.|..||..|:               |:..:|.:.:.:|.
 Worm   203 VSVEQNIYSLAIKMTGSQ-DASVLFAIRLVLHHFLL---------------TEEYLNISTQVLAR 251

  Fly   322 QILVNVQMEISPQHHEIVK---GKNNVNLLSIMERTQTKIIFPDLSDMNVKPLKKSQVTISGRID 383
            :.| |.|:|...:|.|.::   .||||.:.:..|.....|:.|....:||:.|            
 Worm   252 EEL-NYQLENVEEHRERLREVCNKNNVTIQTFPETQSISIVGPPSGVLNVRKL------------ 303

  Fly   384 DVYLARQQLLGNLPVALIFD--FPDNHNDASEIMSLNTKYGVYITLRQKQRQSTLAIVVKGVEKF 446
                    |:|...|.:.||  ..|.|   ..:..|..:.|:.:|.::| ....:.|.:|..|..
 Worm   304 --------LIGLSSVTVQFDCNMMDIH---YPVQQLEQERGIQVTCKRK-NGDIMTITMKSTESK 356

  Fly   447 IDKIYEARQEILRLATPFVKPEIPDYYFMPKDKDLNLAYRTQLTALLAGYVDSPKTPSLLPPSLA 511
            :.::.::|:  |.||.|      |..|..|.|.|                   |......|||| 
 Worm   357 LAEVLQSRE--LLLALP------PTTYSSPDDYD-------------------PNPVMSRPPSL- 393

  Fly   512 GQLTPYANNNHLLLNANGLATPTGVCAPTQKYMQLHNSFQQAQNRSMVAGGQSNNGNYLQVPGAV 576
                                      .|.|..|               |.|             |
 Worm   394 --------------------------TPLQTEM---------------ASG-------------V 404

  Fly   577 APPLKPPTVSPRNSCSQNTSGYQSFSSSTTSLEQSYPPYAQLPGTVSSTSSSTAGSQNRAHYSPD 641
            ...|.||..||:                                                  |||
 Worm   405 RVFLTPPIESPK--------------------------------------------------SPD 419

  Fly   642 STYGSEGGGVGGGGGGGARLGRRLSDGVLLGLSNSNGGGGNSGGAHLLPGSAESYRSLHYDLGGN 706
            .                       .|..|              .|.:|.|:.:.  |.:.|:...
 Worm   420 P-----------------------EDSPL--------------AASILKGAKDI--SKNSDIWKK 445

  Fly   707 KHSGHRAFDFDMKRALGYKAMERTPVAGELRTPTTAWMGMGLSSTSPA----------------- 754
            |....|. :..:|..   :|:....|....|.||..|.|.|.||:.||                 
 Worm   446 KSKADRG-EMLIKAT---QAIFDDSVLSSPRYPTDLWSGYGFSSSLPADLLKGMMDLSTNEPSTN 506

  Fly   755 -PAPLENGENG-----------------AAGGGASSGWRLPPGLGSPYGLSATTGLLDAT--PVN 799
             |..:.:.:.|                 :...|.|..:..||    ....||:|.:.|:.  |.|
 Worm   507 GPPMMNHSQRGLCSVREEDEELSDFSASSTNYGMSRIFEQPP----RNVFSASTSVFDSNSLPYN 567

  Fly   800 RRMQLAKHKDIQTLLTSLGLEHYIKIFVLNEIDLEVFTTLTEENLMELGIAAFGARKKLLTAI 862
            .:..:....|...:|..||...|:......|||:..|..|.|:||.::|::..|||||:..||
 Worm   568 LQWDINYFTDPSMVLAQLGCSEYMTQLRDQEIDMHAFLLLDEQNLKDIGVSTIGARKKIHHAI 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BicCNP_476865.1 vigilin_like_KH 174..240 CDD:239087 28/65 (43%)
vigilin_like_KH 327..393 CDD:239087 14/68 (21%)
SAM_BICC1 805..868 CDD:188919 21/58 (36%)
SAM 807..867 CDD:197735 21/56 (38%)
bcc-1NP_502067.2 vigilin_like_KH 105..171 CDD:239087 28/65 (43%)
SAM 571..636 CDD:197735 21/60 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159378
Domainoid 1 1.000 80 1.000 Domainoid score I5559
eggNOG 1 0.900 - - E1_KOG2208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 221 1.000 Inparanoid score I2280
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004093
OrthoInspector 1 1.000 - - oto19915
orthoMCL 1 0.900 - - OOG6_108156
Panther 1 1.100 - - LDO PTHR10627
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3867
SonicParanoid 1 1.000 - - X4464
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

Return to query results.
Submit another query.