DRSC/TRiP Functional Genomics Resources

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Protein Alignment BicC and Hdlbp

DIOPT Version :9

Sequence 1:NP_476865.1 Gene:BicC / 34946 FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_001288293.1 Gene:Hdlbp / 110611 MGIID:99256 Length:1268 Species:Mus musculus


Alignment Length:582 Identity:127/582 - (21%)
Similarity:213/582 - (36%) Gaps:160/582 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SFNKLMYPSAADVAKPPMVGLEVEAGSIGSLSSLHALP-----STTSVGSGAPSETQSEISSVDS 65
            |..:::..:...|..||       :.||.....|...|     :.|.|.:.|.|.|.|.:|:  .
Mouse   317 SLQEILERTGVSVEIPP-------SDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVSA--P 372

  Fly    66 DWSDIRAIAMKLG------VQNPDDLHTERFKVDRQKL------EQLIKAESSIEGM-----NGA 113
            .|.. |.|..|.|      .|....:|.| |.....|:      |.:..|:..||||     |..
Mouse   373 SWLH-RFIIGKKGQNLAKITQQMPKVHIE-FTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRM 435

  Fly   114 EYF-------FH---------DIMNTTDTY-VSWPCRLKIGAKSKKDPHVRIVGKVDQVQRAKER 161
            :|.       ||         :|....|.| ||    ::|...|:|...:||.|....||:||..
Mouse   436 DYVEINIDHKFHRHLIGKSGANINRIKDQYKVS----VRIPPDSEKSNLIRIEGDPQGVQQAKRE 496

  Fly   162 IL---SSLDSRGTRVIMKMDVSYTDHSYIIGRGGNNIKRIMDD-THTHIHFPDSNRSNPTEKSNQ 222
            :|   |.:::..|:.::   :....|..|||:.|..|:.|.|. ....|:|||     |.:||:.
Mouse   497 LLELASRMENERTKDLI---IEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-----PAQKSDI 553

  Fly   223 VSLCGSLEGVERARALVR------------LSTPLLISFEMPVMGP----------------NKP 259
            |.|.|....||:....::            :|.|:...|...::|.                :.|
Mouse   554 VQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLP 618

  Fly   260 QPDHETPYIKMIETKFN------------------VQVIFSTRPKLHTSLVLVKGS--------- 297
            ..:..:..|.:...:.|                  .:|..|...|||.||:..||.         
Mouse   619 AENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEEC 683

  Fly   298 -------------------EKESAQVRDATQLLINFACESIASQILVNVQMEISPQHHEIVKGKN 343
                               ...|:.|..|.:.|::.|.|.......|:::.:  |::|:.:.||.
Mouse   684 GGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAK--PEYHKFLIGKG 746

  Fly   344 NVNLLSIMERTQTKIIFPDLSDMNVKPLKKSQVTISGRIDDVYLARQQL------LGNLPVALIF 402
            ...:..:.:.|..:||||...|.:     :..:||.|:.|.|..|:::|      |.|:....:.
Mouse   747 GGKIRKVRDSTGARIIFPAAEDKD-----QDLITIIGKEDAVREAQKELEALIQNLENVVEDYML 806

  Fly   403 DFPDNHND-----ASEIMSLNTKY-GVYITLRQKQRQSTLAIVVKGVEKFIDKIYEARQEIL 458
            ..|.:|..     ...:..:..:| ||.::..:...||. .:.:||.:..::...:..|||:
Mouse   807 VDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSD-KVTLKGAKDCVEAAKKRIQEII 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BicCNP_476865.1 vigilin_like_KH 174..240 CDD:239087 20/66 (30%)
vigilin_like_KH 327..393 CDD:239087 17/71 (24%)
SAM_BICC1 805..868 CDD:188919
SAM 807..867 CDD:197735
HdlbpNP_001288293.1 KH-I 77..144 CDD:412160
KH-I 147..221 CDD:412160
KH-I 224..283 CDD:412160
KH-I 297..358 CDD:412160 9/47 (19%)
KH-I 364..433 CDD:412160 19/72 (26%)
KH-I 435..502 CDD:412160 19/70 (27%)
KH-I 507..573 CDD:412160 21/73 (29%)
KH-I 583..644 CDD:412160 7/60 (12%)
KH-I 653..722 CDD:412160 14/68 (21%)
KH-I 726..791 CDD:412160 17/71 (24%)
KH-I 802..867 CDD:412160 11/65 (17%)
KH-I 875..970 CDD:412160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 910..947
KH-I 972..1049 CDD:412160
KH-I 1053..1126 CDD:412160
KH-I 1128..1196 CDD:412160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1213..1268
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844421
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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