DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beat-Ic and beat-VII

DIOPT Version :9

Sequence 1:NP_001285970.1 Gene:beat-Ic / 34945 FlyBaseID:FBgn0028644 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_733162.2 Gene:beat-VII / 43213 FlyBaseID:FBgn0250908 Length:517 Species:Drosophila melanogaster


Alignment Length:545 Identity:113/545 - (20%)
Similarity:193/545 - (35%) Gaps:145/545 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 WISVVLLLILVPDFIEALKD--VSVMIPQAVKRGSNALFTCNYDMENDTLYSVKWYK-GKREFYR 101
            ||..:||.:.....|....|  |::::|:.|:|||:|.|.|.:::..:.|:.|.|.| .|.:|:.
  Fly     5 WIIALLLGLQQTKPINGQSDVLVNLVVPRYVERGSSATFKCTHNVRPEILFKVTWLKVDKGKFFE 69

  Fly   102 YTPKENPAMKVFAMTSGLNVERNLSNQSHVVLQSVPLNISGKFTCEISVEAPTFQTAMVSGEMEV 166
            :....||..: .:...|..::.:.||:..|.|:.|..::||:|.||:|.:.|.| |...:.|:..
  Fly    70 FINGRNPPFR-NSTIEGAEIDWDNSNEQQVTLKDVQFDLSGQFYCEVSTDTPIF-TKASADELMS 132

  Fly   167 VELPEEHTVVTGIQAR--YRIGDLVDGNCSIKYSKPAANLTWTINGIVVPPHHIKTY-------- 221
            |.||:........:.|  :.:|:.:...|:....:||.::||.|||..|...:::|:        
  Fly   133 VFLPQTGPPTIKFRKRTPFAVGEKLFALCNTTRGRPAPHITWLINGKKVEDRYVRTHHVFSFNGK 197

  Fly   222 -----------QTEKRENSTLESVTSAIHFMVTNQ-----------------------------H 246
                       ||:..:....:......:|...:|                             |
  Fly   198 HQHQRRTQQQQQTQLSQQQLQQQYFQQQYFNQYHQQYHIPVGQFMDRYDKSLRWPAGARADEFPH 262

  Fly   247 FLK-----------------GQMRLKCTANIFDIFKEEMESVIEEDRPRIMASGRSYDINNYPLE 294
            ||.                 |.:     ||..|:  .|...|.:          |:||.|...:|
  Fly   263 FLSHHHEGHGHHGSLYNNPFGSL-----ANYHDV--GEFHEVHQ----------RNYDSNKKNME 310

  Fly   295 ----------EHTNGERGGFEDHNESYLTYYSADNTASGASTAAHEIFWQFWPSQLTKL------ 343
                      :|.|..|......||:.|....:...:.|....|        |:...:|      
  Fly   311 LKKQQQMEMKKHRNSNRKYRRHINENALGIIRSTLNSGGFGPQA--------PNMNKELGIPSNA 367

  Fly   344 -PINRQLAGAWHWLC---GGGGAAALLLFFLLQQGPLGHQIINCQYTKPATGKVQQQQRNSG--- 401
             |:|:..||....|.   ||.|.||                        |...|...|:..|   
  Fly   368 GPMNQLAAGYQRPLSHPGGGSGVAA------------------------AAAAVTAAQQEKGMFS 408

  Fly   402 -SSSNIEVTASKAATSSASSVKCFYNCQMAMAMPTRSRDDDDDGGDAYIGSTSANATATATATAD 465
             |..|||:|.....::|...:.|.......:....:..|.........:....|::|:||:.:..
  Fly   409 ISQLNIELTEEHVGSNSRMEITCLSTIPATVGQGEQYADYKTYSVKVEVERQLASSTSTASPSIG 473

  Fly   466 ADAADVAAAGGVASCSIKRLSATLV 490
            ..|.......|..:.:.:|...|:|
  Fly   474 MAALGNGNGHGNETSAGRRAHGTVV 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IcNP_001285970.1 Ig 189..>246 CDD:299845 14/104 (13%)
beat-VIINP_733162.2 Ig 31..118 CDD:299845 28/87 (32%)
IG_like 34..118 CDD:214653 27/84 (32%)
Ig 141..>183 CDD:299845 11/41 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.