DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-Ic and beat-IIa

DIOPT Version :10

Sequence 1:NP_523580.1 Gene:beat-Ic / 34945 FlyBaseID:FBgn0028644 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_524384.3 Gene:beat-IIa / 42086 FlyBaseID:FBgn0038498 Length:431 Species:Drosophila melanogaster


Alignment Length:286 Identity:99/286 - (34%)
Similarity:151/286 - (52%) Gaps:36/286 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KDVGSHGSQSGRS----CICWISVVLLLILVPDFIE-ALKDVSVMI-PQAVKRGSNALFTCNYDM 82
            :.:.||.....|:    |:..:..||||.:  :.:| ||::|:::| |.||:||.:.:..|.||:
  Fly    32 RQIRSHRKSDCRTFPARCLLLLLGVLLLSM--ELVECALRNVNLIIEPPAVRRGQHVVLRCMYDL 94

  Fly    83 ENDTLYSVKWYKGKREFYRYTPKENPAMKVFAMTSGLNVERNLSNQSHVVLQSVPLNISGKFTCE 147
            :...|||.|:|:|:.|||||||.|.|..|||.. .|::|:.:.||.:.|:|::|...:||.|:||
  Fly    95 DGAPLYSAKFYRGQLEFYRYTPGEFPNTKVFPF-PGIHVDVSSSNATQVLLRNVGFGLSGNFSCE 158

  Fly   148 ISVEAPTFQTAMVSGEMEVVELPEEHTVVTGIQARYRIGDLVDGNCSIKYSKPAANLTWTINGIV 212
            ::.:||.|.||.....|:||||||:...|.....||..||::..|||...|:|.|.||:|||.:|
  Fly   159 VTADAPLFSTATAVDTMQVVELPEKRPQVFTEHTRYEPGDVLRANCSTPPSRPRAELTFTINNMV 223

  Fly   213 ---VPPHHIKTYQTEKRENSTLESVTSAIHFMVTNQHFLK----------------------GQM 252
               |...:|:|.........:|:.....|||...|.....                      |.:
  Fly   224 ITHVDTEYIRTIDNLIATRISLKMQLQGIHFSSVNPAIYNNVYGLNSVYGHGGPVYAPNSNPGGL 288

  Fly   253 RLKCTANIFDIFKEEMESVIEEDRPR 278
            .|:|:|.|.|:::|..|  ||...|:
  Fly   289 LLRCSAQIGDLYQEYKE--IELGTPQ 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IcNP_523580.1 Ig 189..259 CDD:472250 23/94 (24%)
beat-IIaNP_524384.3 None

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