DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10839 and lrrc61

DIOPT Version :9

Sequence 1:NP_001246039.1 Gene:CG10839 / 34944 FlyBaseID:FBgn0028858 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001036219.1 Gene:lrrc61 / 553439 ZFINID:ZDB-GENE-060616-245 Length:260 Species:Danio rerio


Alignment Length:143 Identity:45/143 - (31%)
Similarity:66/143 - (46%) Gaps:27/143 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LNSLTEC---QKLSLSSNMIEKITGISGMKNLKVLSLARNNLKTLNGIEPLA--DTLEELWVSYN 103
            |..:.||   ::|.||.|.|..:..:|.::.|..|:|:.|.:..|   ||||  ::|:.|.|:.|
Zfish    45 LGCIGECINLERLDLSGNNITNLGPLSPLRRLLSLNLSANRISNL---EPLATCESLQSLNVAGN 106

  Fly   104 NIEKTKPLESMKALRVFYISFNMIKDWTEFMRMGVPPNLSEITFVGNPLNENMDQSAFTAEAVRR 168
            .|.....|.|:|:||  .:....:||           |....|   ||:.:|........|.   
Zfish   107 VISSVDNLHSLKSLR--RLENIRLKD-----------NTYNFT---NPVCKNPSYRPLILEI--- 152

  Fly   169 LPNMKKLDGEPVI 181
            .||||.||||.|:
Zfish   153 FPNMKVLDGERVV 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10839NP_001246039.1 LRR_RI <37..129 CDD:238064 28/89 (31%)
LRR_4 48..90 CDD:289563 13/44 (30%)
leucine-rich repeat 50..71 CDD:275380 7/23 (30%)
LRR_8 51..105 CDD:290566 19/55 (35%)
leucine-rich repeat 72..94 CDD:275380 9/23 (39%)
leucine-rich repeat 95..116 CDD:275380 7/20 (35%)
leucine-rich repeat 117..141 CDD:275380 4/23 (17%)
leucine-rich repeat 142..171 CDD:275380 5/28 (18%)
lrrc61NP_001036219.1 leucine-rich repeat 54..81 CDD:275378 8/26 (31%)
leucine-rich repeat 98..122 CDD:275378 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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