DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10839 and LRRC49

DIOPT Version :9

Sequence 1:NP_001246039.1 Gene:CG10839 / 34944 FlyBaseID:FBgn0028858 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001185946.1 Gene:LRRC49 / 54839 HGNCID:25965 Length:691 Species:Homo sapiens


Alignment Length:136 Identity:41/136 - (30%)
Similarity:74/136 - (54%) Gaps:10/136 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LNSLTECQKLSLSSNMIEKITGISGMKNLKVLSLARN---NLKTLNGIEPLADTLEELWVSYNNI 105
            |.:|.....|.|..|.|.||..|:.:..|:||:||||   ::..|||:    |:|.||.:.:|.|
Human   179 LENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGL----DSLTELNLRHNQI 239

  Fly   106 EKTKPLESMKALRVFYISFNMIKDWTEFMRMGVPPNLSEITFVGNPLNENMDQSAFTAEAVRRLP 170
            ...:.::::..|:..::|||.|..:.....:....:||:|||.|||:.:   :|.:....::.:.
Human   240 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSS
LSDITFDGNPIAQ---ESWYKHTVLQNMM 301

  Fly   171 NMKKLD 176
            .:::||
Human   302 QLRQLD 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10839NP_001246039.1 LRR_RI <37..129 CDD:238064 30/87 (34%)
LRR_4 48..90 CDD:289563 17/44 (39%)
leucine-rich repeat 50..71 CDD:275380 7/20 (35%)
LRR_8 51..105 CDD:290566 22/56 (39%)
leucine-rich repeat 72..94 CDD:275380 10/24 (42%)
leucine-rich repeat 95..116 CDD:275380 5/20 (25%)
leucine-rich repeat 117..141 CDD:275380 5/23 (22%)
leucine-rich repeat 142..171 CDD:275380 9/28 (32%)
LRRC49NP_001185946.1 LRR_8 118..173 CDD:290566
LRR_4 118..158 CDD:289563
LRR 1 118..139
leucine-rich repeat 119..140 CDD:275380
LRR_4 139..181 CDD:289563 1/1 (100%)
LRR 2 140..161
leucine-rich repeat 141..162 CDD:275380
LRR 3 162..183 1/3 (33%)
LRR_4 163..203 CDD:289563 9/23 (39%)
leucine-rich repeat 163..184 CDD:275380 2/4 (50%)
LRR 4 184..205 7/20 (35%)
leucine-rich repeat 185..206 CDD:275380 7/20 (35%)
LRR_4 205..247 CDD:289563 16/45 (36%)
LRR_8 206..261 CDD:290566 20/58 (34%)
LRR 5 206..227 10/24 (42%)
leucine-rich repeat 207..228 CDD:275380 10/24 (42%)
LRR_4 228..268 CDD:289563 10/39 (26%)
LRR 6 228..249 5/20 (25%)
leucine-rich repeat 229..250 CDD:275380 5/20 (25%)
LRR 7 250..271 5/20 (25%)
leucine-rich repeat 251..275 CDD:275380 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..393
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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