DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10839 and Dnaaf11

DIOPT Version :10

Sequence 1:NP_609776.1 Gene:CG10839 / 34944 FlyBaseID:FBgn0028858 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_062330.1 Gene:Dnaaf11 / 54562 MGIID:1859553 Length:473 Species:Mus musculus


Alignment Length:175 Identity:45/175 - (25%)
Similarity:81/175 - (46%) Gaps:28/175 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KDALAKWEDRNKQPAATATEIGLQFQYPPIEKMDPILNSLTECQKLSLSSNMIEKITGISGMKNL 72
            :|.:.:..:.|.....:..|:.|..|  .||:::.|.....:.:.|.|.:|:|.||..:|.:|.|
Mouse     6 EDLIRRNAEHNDCVIFSLEELSLHQQ--EIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKL 68

  Fly    73 KVLSLARNNLKTLNGIEPLADTLEELWVSYNNIEKTKPLESMKALRVFYISFNMIKDWTEFMRMG 137
            :.|:||.||::.:..:|. .:.|.:|.::.|.|.:   |.|:|.|     :.|:           
Mouse    69 EYLNLALNNIERIENLEG-CEWLTKLDLTVNFIGE---LSSVKTL-----THNI----------- 113

  Fly   138 VPPNLSEITFVGNPLNENMDQSAFTAEAVRRLPNMKKLDGEPVIR 182
               :|.|:..:|||.   .|...:....|..|..:|.|||:.:.|
Mouse   114 ---HLKELFLMGNPC---ADFDGYRQFVVVTLQQLKWLDGKEIER 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10839NP_609776.1 PPP1R42 <37..152 CDD:455733 31/114 (27%)
leucine-rich repeat 50..71 CDD:275380 7/20 (35%)
leucine-rich repeat 72..94 CDD:275380 7/21 (33%)
leucine-rich repeat 95..116 CDD:275380 6/20 (30%)
leucine-rich repeat 117..141 CDD:275380 2/23 (9%)
leucine-rich repeat 142..171 CDD:275380 8/28 (29%)
Dnaaf11NP_062330.1 LRR 1 22..43 6/22 (27%)
PPP1R42 <23..161 CDD:455733 43/158 (27%)
leucine-rich repeat 23..45 CDD:275378 6/23 (26%)
LRR 2 45..66 7/20 (35%)
leucine-rich repeat 46..67 CDD:275378 7/20 (35%)
LRR 3 67..88 7/21 (33%)
leucine-rich repeat 68..89 CDD:275378 7/21 (33%)
LRR 4 89..110 8/28 (29%)
leucine-rich repeat 90..114 CDD:275378 9/45 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..244
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..292
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..473
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.