DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10839 and tilB

DIOPT Version :9

Sequence 1:NP_001246039.1 Gene:CG10839 / 34944 FlyBaseID:FBgn0028858 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster


Alignment Length:169 Identity:41/169 - (24%)
Similarity:75/169 - (44%) Gaps:28/169 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KDALAKWEDRNKQPAATATEIGLQFQYPPIEKMDPILNSLTECQKLSLSSNMIEKITGISGMKNL 72
            ::.:.|..:.|::..:|..||.|..:  .||.::.|.|...:.:.|.|.||:|.::..:..:|.|
  Fly     6 EELVRKKSEHNERLISTLEEISLHQE--DIEVIEHIQNWCRDLKILLLQSNLIARLENLHKLKRL 68

  Fly    73 KVLSLARNNLKTLNGIEPLADTLEELWVSYNNIEKTKPLESMKALRVFYISFNMIKDWTEFMRMG 137
            :.|:                       |:.||||:.:.||..::|....::.|.|::.|....:.
  Fly    69 EYLN-----------------------VAINNIERVENLEGCESLSKLDLTLNFIRELTSVESLC 110

  Fly   138 VPPNLSEITFVGNPLNENMDQSAFTAEAVRRLPNMKKLD 176
            ...||.|:..:|||.   :|...:....|..||.:..||
  Fly   111 GNYNLRELVLIGNPC---VDYPHYRDYVVATLPQLNSLD 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10839NP_001246039.1 LRR_RI <37..129 CDD:238064 22/91 (24%)
LRR_4 48..90 CDD:289563 8/41 (20%)
leucine-rich repeat 50..71 CDD:275380 5/20 (25%)
LRR_8 51..105 CDD:290566 10/53 (19%)
leucine-rich repeat 72..94 CDD:275380 2/21 (10%)
leucine-rich repeat 95..116 CDD:275380 7/20 (35%)
leucine-rich repeat 117..141 CDD:275380 4/23 (17%)
leucine-rich repeat 142..171 CDD:275380 8/28 (29%)
tilBNP_608460.1 LRR_9 1..174 CDD:258718 41/169 (24%)
leucine-rich repeat 23..45 CDD:275378 7/23 (30%)
LRR_4 46..86 CDD:289563 14/62 (23%)
leucine-rich repeat 46..67 CDD:275378 5/20 (25%)
leucine-rich repeat 68..89 CDD:275378 9/43 (21%)
leucine-rich repeat 90..114 CDD:275378 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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