Protein Alignment CG10839 and Lrrc43

DIOPT Version :10

• Sequence 1: NP_609776.1
• Gene: CG10839 / 34944
• FlyBaseID: FBgn0028858
• Length: 182
• Species: Drosophila melanogaster
• Sequence 2: NP_001163867.1
• Gene: Lrrc43 / 288751
• RGDID: 1561461
• Length: 681
• Species: Rattus norvegicus
• Alignment Length: 192
• Identity: 48/192 - (25%)
• Similarity: 76/192 - (39%)
• Gaps: 41/192 - (21%)

  Fly     7 LKDALAKWEDRNKQPAATATEIGLQ----FQY--------PPIEKMDPILNSLTECQKLSLSSNM 59
            |||:.|  |||..:..|....:.::    :.|        ..:..:|..:....:.::|.||:|.
  Rat    94 LKDSSA--EDRFLRELAIQNPLTIKDTFFYSYFRCLRVVDKGVSLVDKEILKFLKLEELVLSANK 156

  Fly    60 IEKITGISGMKNLKVLSLARN--------------NLKTLN-GIEPLADTLEELWVSYNNIEKTK 109
            |:.|...:....||||.|..|              ||:.|. |...|...||.|:|:.||.....
  Rat   157 IKDIDANNLPPTLKVLELYGNLIASMECLCSPPPPNLQHLGLGHNKLLGPLESLYVTSNNWPLLV 221

  Fly   110 PLESMKALRVFYISFNMIKDWTEFMRMGVP--PNLSEITFVGNPLNENMDQSAFTAEAVRRL 169
            .|:         :.||.:.| .:.|.:|:.  ..|..:...||||........||.:::.||
  Rat   222 SLD---------LGFNDLTD-LQSMILGLSTLKCLRLLVLQGNPLALVPYYRGFTVDSLARL 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG10839	NP_609776.1	PPP1R42	<37..152	CDD:455733	33/131 (25%)
		leucine-rich repeat	50..71	CDD:275380	6/20 (30%)
		leucine-rich repeat	72..94	CDD:275380	11/36 (31%)
		leucine-rich repeat	95..116	CDD:275380	7/20 (35%)
		leucine-rich repeat	117..141	CDD:275380	5/25 (20%)
		leucine-rich repeat	142..171	CDD:275380	9/28 (32%)
Lrrc43	NP_001163867.1	leucine-rich repeat	147..168	CDD:275378	6/20 (30%)
		PPP1R42	150..289	CDD:455733	38/134 (28%)
		leucine-rich repeat	169..192	CDD:275378	6/22 (27%)
		leucine-rich repeat	193..219	CDD:275378	10/25 (40%)
		leucine-rich repeat	220..245	CDD:275378	6/34 (18%)