DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18063 and Spata17

DIOPT Version :9

Sequence 1:NP_001162988.1 Gene:CG18063 / 34943 FlyBaseID:FBgn0028856 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_006250511.1 Gene:Spata17 / 498305 RGDID:1565282 Length:363 Species:Rattus norvegicus


Alignment Length:411 Identity:89/411 - (21%)
Similarity:149/411 - (36%) Gaps:138/411 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SNSVFLEDDQFENLEEEFLHNECISLPSDLTRVQSVILDYKQFK--AARTIQRYIHGWLVRENFR 77
            |.|.|||       .:.:..|..         |.||    ::|:  ||..||.:..|..||...|
  Rat     9 SRSDFLE-------SQYYFRNRA---------VDSV----RKFENDAAVAIQSWFRGCQVRAYIR 53

  Fly    78 KLQKSAIIIQKWWRRFEAQKNLLYVAESALQSAVLAHYDKSATLIQTLYRGWWSRKHIFDLTMLK 142
            .|.:...|||||||.:..:|....:.|:|..:..:..|::.|..||..:||:..||:.|:...||
  Rat    54 HLNRVVTIIQKWWRSYLGRKYYQLIVEAAYYTMKMNLYNEMAVRIQRRWRGFRIRKYCFNYYYLK 118

  Fly   143 SV---------------------------QIML-----AKDLIHSLVNYLHATKNSEMLPGIYT- 174
            ..                           :|:|     .||......:||.:||   .:.|:|. 
  Rat   119 EYLRAVSETNDAIREALEEFAEMKEREERKILLELEEKQKDYQARKTHYLLSTK---QISGVYNS 180

  Fly   175 -IRDS----SICLETLEELMATFGFRFYNANACYKMKETLS--MVAQSRKTFTATSYFTDVPYPG 232
             .|:.    .:.|:..:.|....|....:     |...:||  :...|.::|..::....:    
  Rat   181 PFREHPDPWEVRLQKAKPLEHRKGSAMKS-----KTAHSLSSWLACTSARSFPRSASLPPI---- 236

  Fly   233 FNDRGFC-GPRQ--NSAM---------TLNAKDP-EHYELIHIFLSGSRKIGMTTAKLEQKIANI 284
              ||..| ||.:  |..:         ||...:| :|   :|        :.....|.|:::.|:
  Rat   237 --DRKRCQGPFRDINEVLEQRYKPLEPTLRVSEPIDH---LH--------VAREAFKQEERMRNV 288

  Fly   285 AEENRLNMFI--KRDNKKKSFIKRIYL-----------------DMKNWHYSNGDPILPISLFKN 330
            .::    ||:  ...:||:::|..|:.                 |.|.|             ..:
  Rat   289 QDK----MFLPFSSYHKKETYIPMIHTLSTYDSPSYGQKYFRCQDPKKW-------------ISD 336

  Fly   331 SEMPAVLESAKKTLESIFGEL 351
            .:...||.|.:  |.|.:|:|
  Rat   337 KDFQTVLPSFE--LFSKYGKL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18063NP_001162988.1 IQ 78..99 CDD:197470 9/20 (45%)
Spata17XP_006250511.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350903
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CGXK
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto98815
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22706
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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