DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12448 and Spata17

DIOPT Version :10

Sequence 1:NP_723942.2 Gene:CG12448 / 34942 FlyBaseID:FBgn0028857 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001385596.1 Gene:Spata17 / 498305 RGDID:1565282 Length:363 Species:Rattus norvegicus


Alignment Length:291 Identity:59/291 - (20%)
Similarity:104/291 - (35%) Gaps:81/291 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 NAARTIQCHVRGFLARSTLKRQIDAATIISKWWRGFWVRHSKFSFMQQLLQQRIIQYHHDMATKI 129
            :||..||...||...|:.::......|||.||||.:..|......::.......:..:::||.:|
  Rat    34 DAAVAIQSWFRGCQVRAYIRHLNRVVTIIQKWWRSYLGRKYYQLIVEAAYYTMKMNLYNEMAVRI 98

  Fly   130 QALFRGWMTRQY------------------------FQDFQGMK-----SLRIQYVEDMLSSLYR 165
            |..:||:..|:|                        .::|..||     .:.::..|.......|
  Rat    99 QRRWRGFRIRKYCFNYYYLKEYLRAVSETNDAIREALEEFAEMKEREERKILLELEEKQKDYQAR 163

  Fly   166 KVHRMRKEHMLPGIY--ALRESD-----LLSKIEDLSSTFGYRF-----HNGRVRAAIAMKRSF- 217
            |.|.:.....:.|:|  ..||..     .|.|.:.|....|...     |:.....|....||| 
  Rat   164 KTHYLLSTKQISGVYNSPFREHPDPWEVRLQKAKPLEHRKGSAMKSKTAHSLSSWLACTSARSFP 228

  Fly   218 -------INDRRHEFRKGNTYSKVPYPGPYIENINDLEFTLPKRMTPRLQRTILV---------- 265
                   |:.:|.:             ||:    .|:...|.:|..| |:.|:.|          
  Rat   229 RSASLPPIDRKRCQ-------------GPF----RDINEVLEQRYKP-LEPTLRVSEPIDHLHVA 275

  Fly   266 ---YDKAMRDKNV-EKVYMNYSTKRRMSMHV 292
               :.:..|.:|| :|:::.:|:..:...::
  Rat   276 REAFKQEERMRNVQDKMFLPFSSYHKKETYI 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12448NP_723942.2 IQCD 83..>104 CDD:467745 7/20 (35%)
Spata17NP_001385596.1 None

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