DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4793 and CLIPB18

DIOPT Version :9

Sequence 1:NP_723941.2 Gene:CG4793 / 34941 FlyBaseID:FBgn0028514 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_001238237.1 Gene:CLIPB18 / 4578288 VectorBaseID:AGAP009215 Length:359 Species:Anopheles gambiae


Alignment Length:374 Identity:102/374 - (27%)
Similarity:154/374 - (41%) Gaps:74/374 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SILLLVLGFSRI---QALFCGGSMAKECVQRNRC-RIGTETGRP-------IIDFRGLNNGNQGC 58
            ::.||::.|.:|   |...|.|  .:.|:..|.| |.|.....|       :.:||     ::.|
Mosquito    11 TVALLIVPFCQIVVSQFHQCTG--GETCININECPRFGPHYHEPAKWTEELLNEFR-----SKVC 68

  Fly    59 ESGQT--------CCPKTEILQYPVQADNQP--LPT----ECG--HVNRIGVGFTITNARDIAQK 107
            :..|:        ||.:..    ....:|:.  |.|    |||  ..:|:..|       ..|:.
Mosquito    69 KREQSNGRNLYKVCCKRAA----TGNKNNRERGLATLDLEECGAYSADRMAYG-------QEARL 122

  Fly   108 GELPWMVALLDSRSRLPLGGGSLITRDVVLTSS--TKTLEVPEKYLIVRAGEW------DFESIT 164
            .:.||| |||...|...:.||:||.|..|||::  .|..:|    ..||.||:      |::...
Mosquito   123 FQFPWM-ALLMLNSVKFVCGGTLINRRYVLTAAHCLKNTQV----TTVRLGEFDISTPIDYDKRG 182

  Fly   165 EERA--HEDVAIRKIVRHTNLSVENGANNAALLFLARPLKLDHHIGLICLP-PPNRNFIHNRCIV 226
            ::.|  .:|:||.:.:.|...|.....|:..|:.:|.....:.::..|||| .|..........|
Mosquito   183 DQHAPPPQDIAIEQTIVHEAYSTRLKVNDIGLIRMAEEAAYNDNVSPICLPVSPAMRTTQTTYFV 247

  Fly   227 SGWGKKTALDNS-YMNILKKIELPLVDRSVCQTKL--QGPYGKDFILDNSLICAGGEPGKDTCKG 288
            :|||   |.::: |.|.|...::.|:....|...|  ...|.|   ::|..:||.|....|.|.|
Mosquito   248 AGWG---ATESAFYSNRLLFGKVALLTNDQCAQHLLRVDSYTK---INNDQMCAIGANLTDNCTG 306

  Fly   289 DGGAPLACPLQSDPNRYELLGIVNFGF-GCG-GPLPAAYTDVSQIRSWI 335
            |.|.||  ...|...||...|:|:.|. .|| ...|..||.|.....||
Mosquito   307 DSGGPL--KTISINARYVQYGVVSLGLRTCGKQSAPGVYTRVENYADWI 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4793NP_723941.2 Tryp_SPc 105..337 CDD:238113 75/247 (30%)
Tryp_SPc 105..335 CDD:214473 73/245 (30%)
CLIPB18XP_001238237.1 Tryp_SPc 117..356 CDD:238113 76/257 (30%)
Tryp_SPc 117..353 CDD:214473 74/255 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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