DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4793 and CG30414

DIOPT Version :9

Sequence 1:NP_723941.2 Gene:CG4793 / 34941 FlyBaseID:FBgn0028514 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_001163264.1 Gene:CG30414 / 37705 FlyBaseID:FBgn0050414 Length:305 Species:Drosophila melanogaster


Alignment Length:300 Identity:79/300 - (26%)
Similarity:123/300 - (41%) Gaps:73/300 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 GHVNRIGVGFT-------ITNARDIAQKGELPWMVALLDSRSRLPLGGGSLITRDVVLTSSTKTL 144
            ||:.....|.|       ||...| |.....||||.:|..:    |.||||||...|||::...:
  Fly    23 GHLLDSSCGTTKPEFIPMITGGAD-AGLFSNPWMVKVLGEK----LCGGSLITSRFVLTAAHCIV 82

  Fly   145 E----------------------VPEKYLI--VRAGEWDF----ESITEERAHEDVAIRKIVRHT 181
            .                      ||:.|.:  :|.||:|.    :.....:::|....|||: |.
  Fly    83 STHMRVRLGEYKTRFPGKDCSRCVPKSYKLRRIRLGEYDTRFPGKDCCVPKSYELAVDRKIL-HA 146

  Fly   182 --NLSVENGANNAALLFLARPLKLDHHIGLICL-------PPPNRNFIHNRCIVSGWGKKTALDN 237
              ||:::   |:..||.:...::...::..|||       ..|..|       ::|||  ...|.
  Fly   147 DYNLNLD---NDIGLLRMKSFVQYSDYVRPICLLVEGHMAESPIFN-------ITGWG--VTNDG 199

  Fly   238 SYMNILKKIELPLVDRSVCQTKLQGPYGKDFILDNSLICAGGEPGKDTCKGDGGAPLAC--PLQS 300
            :....|::..:...|...|::|    :.|.  :|.|.|||.| ...|.|.||.|.||:.  |...
  Fly   200 TPSRRLQRATVYNTDLHFCRSK----FTKQ--VDESQICAAG-TNSDACHGDSGGPLSAQVPFAG 257

  Fly   301 DPNRYELLGIVNFGFGCGGPLPAAYTDVSQIRSWIDNCIQ 340
            ....:: .|:|::|....... :.||:|:..|.||.|.|:
  Fly   258 SWLTFQ-YGLVSYGSAACHSF-SVYTNVTHHRDWIVNAIE 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4793NP_723941.2 Tryp_SPc 105..337 CDD:238113 70/270 (26%)
Tryp_SPc 105..335 CDD:214473 68/268 (25%)
CG30414NP_001163264.1 Tryp_SPc 41..290 CDD:214473 71/275 (26%)
Tryp_SPc 41..290 CDD:238113 71/275 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24256
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.