DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4793 and l(2)k05911

DIOPT Version :9

Sequence 1:	NP_723941.2	Gene:	CG4793 / 34941	FlyBaseID:	FBgn0028514	Length:	910	Species:	Drosophila melanogaster
Sequence 2:	NP_723797.3	Gene:	l(2)k05911 / 34731	FlyBaseID:	FBgn0284244	Length:	639	Species:	Drosophila melanogaster

Alignment Length:	292	Identity:	87/292 - (29%)
Similarity:	135/292 - (46%)	Gaps:	49/292 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    68 TEILQYPVQ-ADNQPLPTECGHVNRIGVGFTITNARDI----AQKGELPWMVALLDSRSRLPLGG 127
            |...:.||. ..::.||.:||:.|.:    |....|.:    |...|.||:..|..|..:  ..|
  Fly   368 TTTTRRPVSGTSSEGLPLQCGNKNPV----TPDQERIVGGINASPHEFPWIAVLFKSGKQ--FCG 426

  Fly   128 GSLITRDVVLTSSTKTLEVPEKYLIVRAGEWDFESITE-----------ERAHEDVAIRKIVRHT 181
            |||||...:||::         :.:.|...||..::|.           |..|....|:::|||.
  Fly   427 GSLITNSHILTAA---------HCVARMTSWDVAALTAHLGDYNIGTDFEVQHVSRRIKRLVRHK 482

  Fly   182 NLSVENGANNAALLFLARPLKLDHHIGLICLP----PPNRNFIHNRCIVSGWGKKTALDNSYMNI 242
            ........|:.|:|.|:.|:.....|..||||    ..:|::......|:|||.... :....:|
  Fly   483 GFEFSTLHNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRE-NGPQPSI 546

  Fly   243 LKKIELPLVDRSVCQTKLQGPYGK---DFILDNSLICAGGEPGKDTCKGDGGAPLACPLQSDPNR 304
            |:|:::|:...:.|..|    ||:   ..|:: |:||| |:..||:|.||.|.|:..   :|..|
  Fly   547 LQKVDIPIWTNAECARK----YGRAAPGGIIE-SMICA-GQAAKDSCSGDSGGPMVI---NDGGR 602

  Fly   305 YELLGIVNFGFGCG-GPLPAAYTDVSQIRSWI 335
            |..:|||::|.||| |..|..||.|:.:..||
  Fly   603 YTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWI 634

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4793	NP_723941.2	Tryp_SPc	105..337	CDD:238113	77/250 (31%)
CG4793	NP_723941.2	Tryp_SPc	105..335	CDD:214473	75/248 (30%)
l(2)k05911	NP_723797.3	CLIP	111..174	CDD:197829
		Tryp_SPc	399..634	CDD:214473	76/255 (30%)
		Tryp_SPc	400..637	CDD:238113	77/256 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24256
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010