DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4793 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_723941.2 Gene:CG4793 / 34941 FlyBaseID:FBgn0028514 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:295 Identity:88/295 - (29%)
Similarity:134/295 - (45%) Gaps:55/295 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 TEILQYPVQ-ADNQPLPTECGHVN-------RIGVGFTITNARDIAQKGELPWMVALLDSRSRLP 124
            |...:.||. ..::.||.:||:.|       ||..|..       |...|.||:..|..|..:  
  Fly   368 TTTTRRPVSGTSSEGLPLQCGNKNPVTPDQERIVGGIN-------ASPHEFPWIAVLFKSGKQ-- 423

  Fly   125 LGGGSLITRDVVLTSSTKTLEVPEKYLIVRAGEWDFESITE-----------ERAHEDVAIRKIV 178
            ..||||||...:||::         :.:.|...||..::|.           |..|....|:::|
  Fly   424 FCGGSLITNSHILTAA---------HCVARMTSWDVAALTAHLGDYNIGTDFEVQHVSRRIKRLV 479

  Fly   179 RHTNLSVENGANNAALLFLARPLKLDHHIGLICLP----PPNRNFIHNRCIVSGWGKKTALDNSY 239
            ||.........|:.|:|.|:.|:.....|..||||    ..:|::......|:|||.... :...
  Fly   480 RHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRE-NGPQ 543

  Fly   240 MNILKKIELPLVDRSVCQTKLQGPYGK---DFILDNSLICAGGEPGKDTCKGDGGAPLACPLQSD 301
            .:||:|:::|:...:.|..|    ||:   ..|:: |:||| |:..||:|.||.|.|:..   :|
  Fly   544 PSILQKVDIPIWTNAECARK----YGRAAPGGIIE-SMICA-GQAAKDSCSGDSGGPMVI---ND 599

  Fly   302 PNRYELLGIVNFGFGCG-GPLPAAYTDVSQIRSWI 335
            ..||..:|||::|.||| |..|..||.|:.:..||
  Fly   600 GGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWI 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4793NP_723941.2 Tryp_SPc 105..337 CDD:238113 77/250 (31%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 2/7 (29%)
Tryp_SPc 400..637 CDD:238113 79/263 (30%)
Blue background indicates that the domain is not in the aligned region.

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