DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4793 and CLIPB2

DIOPT Version :9

Sequence 1:NP_723941.2 Gene:CG4793 / 34941 FlyBaseID:FBgn0028514 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_312956.3 Gene:CLIPB2 / 1273920 VectorBaseID:AGAP003246 Length:355 Species:Anopheles gambiae


Alignment Length:389 Identity:111/389 - (28%)
Similarity:162/389 - (41%) Gaps:83/389 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDRLSILLLVLGFSRIQALFCGGSMAKECVQRNRC-RIGTETGRPII------------------ 46
            |.:..:..|||      ||| |.|:|.|  |..|| ....:||:.::                  
Mosquito     1 MGKAKVFPLVL------ALF-GVSVALE--QGQRCVNPARQTGKCVLVRECASLLAIYSKRFTTP 56

  Fly    47 -DFRGLNNGNQGCESGQ---TCCPKTEILQYPVQADNQPLPT--ECG--HVNRIGVGFTITNARD 103
             :.:.|.:...| |.|:   .||...:      |......||  |||  ..:||..|.|      
Mosquito    57 EETQFLASSRCG-EIGRKTLVCCASEQ------QTRTSSFPTSPECGIQVTDRIIGGQT------ 108

  Fly   104 IAQKGELPWMVALLDSRSRLPLG------GGSLITRDVVLTSSTKTLEVPEKYLI--VRAGEWDF 160
             .:..|.|| .||::.|.  |..      ||:||....:||::.....:|..:.:  ||.||||.
Mosquito   109 -TELEEFPW-TALIEYRK--PGNQYDFHCGGALINARYILTAAHCVQSLPRGWQLNGVRLGEWDL 169

  Fly   161 ESITE------ERAHEDVAIRKIVRHTNLSVENGA--NNAALLFLARPLKLDHHIGLICL----P 213
            .:..:      .....|:.|...|.|......:.|  |:.||:.|.:.:.....|..|||    |
Mosquito   170 STANDCSDGICSAGPIDLEIESFVAHAGYDAADTAHTNDIALIRLRQDVASSEMIRPICLPLTEP 234

  Fly   214 PPNRNFIHNRCIVSGWGKKTALDNSYMNILKKIELPLVDRSVCQTKLQGPYGKDFILDNSLICAG 278
            ..:||.:......:||||..:...|...:  |:||.:.|.|.|:   |...|.:..|..|.:|||
Mosquito   235 QRSRNRVGTVSFAAGWGKTESASASERKL--KVELTVQDPSRCR---QIYRGINIALKASQMCAG 294

  Fly   279 GEPGKDTCKGDGGAPLACPLQSDPNRYELLGIVNFGFG-CG-GPLPAAYTDVSQIRSWIDNCIQ 340
            |..|||||.||.|.||   :......:.|:|:|:||.. || ...|..||:|.:...||::.:|
Mosquito   295 GLQGKDTCTGDSGGPL---MAKSAGAWYLIGVVSFGLSKCGTAGYPGVYTNVVEYLDWIESNVQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4793NP_723941.2 Tryp_SPc 105..337 CDD:238113 78/253 (31%)
Tryp_SPc 105..335 CDD:214473 76/251 (30%)
CLIPB2XP_312956.3 CLIP 26..78 CDD:288855 7/52 (13%)
Tryp_SPc 102..350 CDD:214473 80/265 (30%)
Tryp_SPc 103..353 CDD:238113 81/267 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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