DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4793 and gprin3

DIOPT Version :9

Sequence 1:NP_723941.2 Gene:CG4793 / 34941 FlyBaseID:FBgn0028514 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_017951795.1 Gene:gprin3 / 101733019 XenbaseID:XB-GENE-6468967 Length:725 Species:Xenopus tropicalis


Alignment Length:551 Identity:93/551 - (16%)
Similarity:167/551 - (30%) Gaps:215/551 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LFCGGSMAKECVQRNRCRIGTETGRPIIDFRGLNNGNQGCESGQTCCPKTEIL----QYPVQADN 79
            |.|..:|..|..::       |:|..|..||              .|.:.|:|    ...::...
 Frog    55 LICSSNMTSEQERQ-------ESGSGISSFR--------------TCNELELLPPLVPQAIKDSA 98

  Fly    80 QPLPT-ECGHVNRIGVGFTITNARDIAQKGELPWMVALLDSRSRLPLGGGSLITRDVVLTSSTKT 143
            ||:.| :..:::..|....::.|:           ::|||.::    .......:|..|.:...:
 Frog    99 QPISTIKNTYLSTDGNAVLLSKAQ-----------LSLLDEKT----ANDEKSVKDNTLVAPLVS 148

  Fly   144 LEV--------PEKYLIVRAGEWDFESITEERAHEDVAIRKIVRHTNLSVENGANNAALLFLARP 200
            .|.        ..|.|:....:...:|:.:.: ..|.::..:..|...|:.:|..||:.:     
 Frog   149 AEAGMQVSSDFKNKPLVESEPDKGLDSLLQNK-EADPSLPSLPTHKTESINSGTQNASTI----- 207

  Fly   201 LKLDHHIGLICLPPPNRNFIHNRCIVSGWGKKTALDNSYMNILKKIELPLVDRSVCQTKLQGPYG 265
                               |.:..:::..|:.|                                
 Frog   208 -------------------IESEGVITAEGEST-------------------------------- 221

  Fly   266 KDFILDNSLICAGGEPGKDTCKGDGGAPLACPLQSDPNRYELLGIVNFGFGCGGPLPAAYTDVS- 329
            ||.|..|.  |......||..|.:..     .:::||                 |||:.:.::. 
 Frog   222 KDSITSNE--CHKLSFEKDKIKKENE-----EVETDP-----------------PLPSRFKEMGT 262

  Fly   330 ----QIRSWI--DNCIQA------EAVHYSPQL------------------------GNVGQSPA 358
                .:.:|.  |..:||      ::|..||.:                        ||.|.|  
 Frog   263 MTSFSLENWTTQDAEVQAVANVENKSVSTSPSILAAFLKANSPALKERQEQVCIIYQGNPGAS-- 325

  Fly   359 PLDRYIPNIGLE---TQN-------------------EVHSPVQGSLHNVVYQTGGVG------Y 395
            .|||  .|..|:   :||                   ::|:.....|....:|...:|      |
 Frog   326 QLDR--ANFALQAQLSQNQLAPKLCFQAPDALSSQPLQMHTKSPPDLARPTFQHTEIGRNSQILY 388

  Fly   396 IRGM-GQGTAFQGPVQVGELIPNEGTVSGGLVYDSNEIQKFNQGGIYIPHVGQGNSDNRYYPNPE 459
            ...: |||..|:...|:....|:...::...||..| |:...|..   |......|:..::..||
 Frog   389 RNEIEGQGLCFREMPQMQMASPSPILMNVKPVYQIN-IENSAQPK---PRTMDMYSEPSHFRAPE 449

  Fly   460 IGAVPVGNPIPNEGNAFGGRGYDFNEIQKHN 490
            |.         |:.......|.:  .||.||
 Frog   450 IN---------NKSRLHHLSGVE--NIQLHN 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4793NP_723941.2 Tryp_SPc 105..337 CDD:238113 32/246 (13%)
Tryp_SPc 105..335 CDD:214473 31/242 (13%)
gprin3XP_017951795.1 GRIN_C 600..720 CDD:373668
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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