DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4793 and LOC100331291

DIOPT Version :9

Sequence 1:NP_723941.2 Gene:CG4793 / 34941 FlyBaseID:FBgn0028514 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_009295692.1 Gene:LOC100331291 / 100331291 -ID:- Length:932 Species:Danio rerio


Alignment Length:337 Identity:83/337 - (24%)
Similarity:133/337 - (39%) Gaps:58/337 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RIQALFCGGSMAKECVQRN-RCRIGTETGRPIIDFRGLNNGNQGCESGQTCCPKTEILQYPVQAD 78
            |...|.|..:.:|.|...: :|..|          :.||..|..|:..:.|...::.|:      
Zfish   630 RSDELNCTRAFSKGCSPSSFKCASG----------KCLNKMNPECDGIKDCKDGSDELR------ 678

  Fly    79 NQPLPTECGHVNRIGVGFTITNARDIAQKGELPWMVALLDSRSRLPLGGGSLITR---------- 133
                   ||...|......|....| ||.|..||.|:|...|.....|...:.:|          
Zfish   679 -------CGCGTRPRKRAKIVGGTD-AQAGSWPWQVSLQMERYGHVCGASLVASRWLVSAAHCFQ 735

  Fly   134 --DVVLTSSTKTLEVPEKYLIVRAGEWDFESITEERAHEDVAIRKIVRHTNLSVENGANNAALLF 196
              |.:..|..::...   |:.:|.    ..|::...|...  ||:||.|:.........:.|||.
Zfish   736 DSDAIKYSDARSWRA---YMGMRV----MNSVSNAAATRQ--IRRIVLHSQYDQFTSDYDIALLE 791

  Fly   197 LARPLKLDHHIGLICLPPPNRNFIH-NRCIVSGWGKKTALDNSYMNILKKIELPLVDRSVCQTKL 260
            |:.|:..:..:..:|:|.|:..|.. ..|.|:|||..|. :.....:|::..:.:::.:.|....
Zfish   792 LSAPVFFNELVQPVCVPAPSHVFTSGTSCFVTGWGVLTE-EGELATLLQEATVNIINHNTCNKMY 855

  Fly   261 QGPYGKDFILDNSLICAGG-EPGKDTCKGDGGAPLACPLQSDPNRYELLGIVNFGFGCGGP-LPA 323
                  |..:...::|||. :.|.|.|:||.|.||.|..:.  .|:.|.|||::|.||... .|.
Zfish   856 ------DDAVTPRMLCAGNIQGGVDACQGDSGGPLVCLERG--RRWFLAGIVSWGEGCARQNRPG 912

  Fly   324 AYTDVSQIRSWI 335
            .||.|.:...||
Zfish   913 VYTRVIKFTDWI 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4793NP_723941.2 Tryp_SPc 105..337 CDD:238113 65/246 (26%)
Tryp_SPc 105..335 CDD:214473 63/244 (26%)
LOC100331291XP_009295692.1 SEA 136..>220 CDD:307516
CUB 315..415 CDD:238001
CUB 421..528 CDD:238001
LDLa 536..568 CDD:238060
LDLa 606..636 CDD:238060 2/5 (40%)
LDLa 644..679 CDD:238060 9/57 (16%)
Tryp_SPc 691..927 CDD:238113 67/253 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.